| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0841 |
|---|
| Symbol | |
|---|
| ID | 6461168 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | + |
|---|
| Start bp | 877029 |
|---|
| End bp | 878042 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642727093 |
|---|
| Product | glycosyl transferase family 2 |
|---|
| Protein accession | YP_002017747 |
|---|
| Protein GI | 194335953 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1216] Predicted glycosyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACTCT CTCCCTCGGT TGATATCATT ATTCCCCATT ACAGGAGGCG CGACATGCTT
GAGCGCTGCC TTGATTCGCT CGAACAGAGC AGCTATCCCT CCATGGGCAT CATCGTGGTC
GATAACGGTG GCAGCGAGGC GGGCCTTGTT TTTCTTGTCA AGCGTTACCG CAATGCACGT
CTGTTACGAC TTCCGGAAAA CAGGGGGTAT GCCGGAGGTT GCAACGCGGG GCTGAAAAGC
TCTTCGGCTG ACTATGTGGT TTTCATGAAT GACGATACGG AGCACGATCC GATGTGGCTT
GAACAGCTTG TTACGGCTGC TCTTGCCGAT AGCCATATGG GAGCCTTGCA GCCTAAAATC
CTTTCGCTTA AGCCTTATCG CAAGGGCAAA AAGATCTTTG ATTATGCCGG TGCTGCGGGC
GGTATGATGG ATCAGCTTGG TTATCCCTGG TGCCTTGGTC GGACATTTTC CGGTGTTGAG
AGCGACAGGG GGCAGTACGA TTGCGGGAAG GAAATTTTCT GGGCATCGGG TGTTGCCATG
TTTGTAAAAC GAGCGGTGGC CGAAGAGCTT GGAGGGTTTG ATGAGGATTT TTTCATGCAG
ATGGAGGAGA TTGACCTCTC CTGGCGGATG AAGCTTGCTG GATACCGCAT AGCATCGGTT
CCTTCATCAC TTGTTCTGCA TGAAGGGGGT GCATCGCTGC AGGGCGGATC GGCAGAAAAA
ATTTATCTCA ATCATCGCAA TAATGTGACT ATGCTTCTGA AGAACCGTGG TATGGCAGGG
CTTCTGTGGG TGCTTCCGCT GCGTCTGTTG CTTGACCTTG CGGTTGCACT CTTTTATCTC
ACACAGTTTC CCGGATCGCT GAAAAAATCA GGAGCAGTGT TCCGCGCATG GTCTTTCAAT
CTCCGGGCTC TTGCTGCGAC CATGAAGAAA CGCCGCACGA TACAGACGTC AAGGGTGGTT
GATGATCGTA CCATTTTTCG TGACGCTCCG CCCTCACTCC TTTTCAGACG GTAA
|
|---|
| Protein sequence | MALSPSVDII IPHYRRRDML ERCLDSLEQS SYPSMGIIVV DNGGSEAGLV FLVKRYRNAR
LLRLPENRGY AGGCNAGLKS SSADYVVFMN DDTEHDPMWL EQLVTAALAD SHMGALQPKI
LSLKPYRKGK KIFDYAGAAG GMMDQLGYPW CLGRTFSGVE SDRGQYDCGK EIFWASGVAM
FVKRAVAEEL GGFDEDFFMQ MEEIDLSWRM KLAGYRIASV PSSLVLHEGG ASLQGGSAEK
IYLNHRNNVT MLLKNRGMAG LLWVLPLRLL LDLAVALFYL TQFPGSLKKS GAVFRAWSFN
LRALAATMKK RRTIQTSRVV DDRTIFRDAP PSLLFRR
|
|---|
| |