| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0810 |
|---|
| Symbol | |
|---|
| ID | 6461250 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | + |
|---|
| Start bp | 847741 |
|---|
| End bp | 849033 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 642727063 |
|---|
| Product | Flavocytochrome c sulphide dehydrogenase flavin-binding |
|---|
| Protein accession | YP_002017717 |
|---|
| Protein GI | 194335923 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0480988 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGGTA AACTTTCACG CAGGGATTTC AATAAGCTGC TTGTCAGCGG GGTTGCAGGT
GCGGCATTTG GTATCGCAGG CTTTTCAAAA CCGCTGTTTG CCGCGTCAAG CCGGGTGGTG
ATCATCGGGG GGGGATTTGG AGGCGCGGCG GCGGCAAAGT ATCTTCGGAA GCTTGACCCG
TCCATATCGG TTACCCTTGT TGAGCCGAAA GCGATTTTTC ATACCTGCCC GATCAGCAAC
TGGGTTATTG CTGGTTTGAA AACATTGCCG GATATTGCCC AGAGCTATTC CGTCCTGAAG
AGCCGCTATC AGGTTACCGT GATTGCCGAT ACGGCTGTTG CCATCGATGC GCCTGCCGGA
AGGGTTACCC TGAAAAGCGG CAAGGTGCTT CATTATGATC GATTGATCGT CTCTCCGGGA
ATTGATTTCA AATGGGATGC CATTCCGGGT TACAGTCAGG CTGTTGCAGA AAAAAATATG
CCCCACGCCT TTCAGGCCGG TTCACAGACC ATGTTGCTCC ATAAGCAACT GATTGCCCTG
AAAGATGGAA GCAACGTCTT GATCTGTCCC CCGGCAAATC CTCTTCGCTG TCCTGCCGCA
CCCTATGAAA GGGCCAGCCT CATGGCCATG TATCTGAAAA AGTATAAACC GAAATCGAAA
ATCATTATTC TTGACGACAA GGAGAAGTTT TCGAAGCAGG AGCTCTTTAT GCAGGGATGG
GAGCGGTTTT ATCCGGGAAT GATTGAGTGG CGAGCGGCTA CTGCAGGCGG AAAGGTTGAA
AAGGTCGATG GTGCTGCCAT GACCGTGACC ACTGAGTTTG GTGATGAGCC TGGTGGCGTT
ATCAATGTCA TTCCTCCCCA GAAAGCAGGA TCTATTGCTT TTGAAGCTGC CCTTACCGAT
GCAACAGGGT GGTGCCCGGT TCACCCAACT ACCTTTGAAT CAACCATTCA CCCGGGTATT
CATGTTATCG GTGATGCCTG TATTGCCGGG GATATGCCGA AATCCGGTTT CGCTGCAAGC
AGTCAGGGAA AGGTTGCCGC TGTCGCAATT GCAAGCCTTT TACGAGGAAA AGTGCCTGTT
TCTCCCTCTC TGGTAAGCAC CTGTTACAGT CTTATCGCCC CTGGTTATGC CATATCGGTT
GCCGGTGTCT ATAATTTGAG TTCTTCGGGT ATTGTCGATA TCAAGGGAGC TGGCGGTTTG
ACACCTATGG ACGCAAGTGA TGATCATCTT CGTCAGGAAG CTGCTTTTGC ATGGGGCTGG
TATAAAAATA TTACCAAAGA CAACTGGGGA TAA
|
|---|
| Protein sequence | MNGKLSRRDF NKLLVSGVAG AAFGIAGFSK PLFAASSRVV IIGGGFGGAA AAKYLRKLDP
SISVTLVEPK AIFHTCPISN WVIAGLKTLP DIAQSYSVLK SRYQVTVIAD TAVAIDAPAG
RVTLKSGKVL HYDRLIVSPG IDFKWDAIPG YSQAVAEKNM PHAFQAGSQT MLLHKQLIAL
KDGSNVLICP PANPLRCPAA PYERASLMAM YLKKYKPKSK IIILDDKEKF SKQELFMQGW
ERFYPGMIEW RAATAGGKVE KVDGAAMTVT TEFGDEPGGV INVIPPQKAG SIAFEAALTD
ATGWCPVHPT TFESTIHPGI HVIGDACIAG DMPKSGFAAS SQGKVAAVAI ASLLRGKVPV
SPSLVSTCYS LIAPGYAISV AGVYNLSSSG IVDIKGAGGL TPMDASDDHL RQEAAFAWGW
YKNITKDNWG
|
|---|
| |