| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0804 |
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| Symbol | |
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| ID | 6461260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 841059 |
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| End bp | 842480 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642727057 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_002017711 |
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| Protein GI | 194335917 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAACGC TTAAAGATCA AATAGCTCGC TGGAACCTTT CCACCAAACG GGTTGCAGCG
CCTCCTCAAT CGGCGCCTGC ACAACCTTAT GTCGTTGAAG TTCCGACCTC GACTGCGCCA
GTGCCGGTGA TAAAAGCCAG AGCATCCGCA GGGGTTGACT CTTACGCTAC CAAAACGAAG
TTGCACCAAA AGCTGCTCAC CCGTATTGAC CTCAGCTCCA TCGAAAGCCT GACCCCCGAG
CAACTGCGCA ACGAGCTCGG GGTCTTGCTT GTTGAGCTTA TCGAAGAAGA GGAGATCCGC
TTTAATGATC AAGAGCGTGC TAAATTGGTA GCCGACCTCA AAAATGAAAT CATGGGTCTG
GGTCCTTTGG AGCCCTTGCT TGCCGATCCT GCCATTTCTG AAATCATGGT CAACGGCTGC
CAAAACGTCT ATATCGAAAA AAACGGATGC ATTCAGCCCA CCAATATCCA TTTTAATGAC
GACGCTCATC TAATGAAAAT CATCGATAAA ATCGTCTCTC GAGTGGGGCG GCGCATCGAT
GAATCGTGCC CGATGGTCGA TGCCCGCCTG CCCGATGGGG CGCGCGTTAA TGCCATCATT
CCGCCATTGG CTCTCGATGG CCCTGTCCTC ACCATTCGGC GCTTTGCGGT TGTGCCCTTG
CAAATGAGCG ACTTCATTGA GAAAAATACC CTCACATCCG CCATGGCCGA ACTGTTGTCA
GCTCTGGTTA AAGCAAAGTG CAATATTATC ATTTCCGGGG GCACTGGTTC TGGTAAAACC
ACGCTGCTCA ACATTCTCTC GAGCTTTATT CCCGAGAACG AACGCATCGT CACCATCGAA
GACACTGCCG AATTGCAGCT TCAGCAAAAT CACGTCATTC GACTGGAGAC GCGTACGCCC
AACATCGAAG GTAAAGGTGA AATCACTATG CGCGTCCTTG TGAAAAACAG CTTGCGTATG
CGGCCCGACC GCATCGTGCT GGGCGAGGTC CGTAGCTCCG AGGTGATCGA CATGCTGCAA
GCCATGAACA CCGGCCACGA GGGCTCACTC ACCACCATTC ACGCCAACAG CCCGCGGCAT
GCGCTGGGCA GGCTCGAAAA TCTGGTAGGC ATGGATGGCA TCACTCTACC CACCAAAGCC
CTGCGCGAGC TTATTTCCTC GTCGCTTGAC TTTATCATCC AAATTACGCG ACTCAATGAT
GGTAGCCGTA AAATCACGAG CATCGAGGAA ATCATCGGCA TGGAAGGAGA CATCATTACC
ACCCAGGAAA TTTTTTGCTA CAAGCGTATG GGCATTAACC CGGACGGATC CGTGCAAGGA
ATGTTCAGGG CCACGGGTGT GCGTCCCAAA GTGTATGAAA AAATCCACAC CTATGGCATT
TGCCTCAGTG ATGGCATGTT CGACCCCGGC GACAACGACT AA
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| Protein sequence | MGTLKDQIAR WNLSTKRVAA PPQSAPAQPY VVEVPTSTAP VPVIKARASA GVDSYATKTK
LHQKLLTRID LSSIESLTPE QLRNELGVLL VELIEEEEIR FNDQERAKLV ADLKNEIMGL
GPLEPLLADP AISEIMVNGC QNVYIEKNGC IQPTNIHFND DAHLMKIIDK IVSRVGRRID
ESCPMVDARL PDGARVNAII PPLALDGPVL TIRRFAVVPL QMSDFIEKNT LTSAMAELLS
ALVKAKCNII ISGGTGSGKT TLLNILSSFI PENERIVTIE DTAELQLQQN HVIRLETRTP
NIEGKGEITM RVLVKNSLRM RPDRIVLGEV RSSEVIDMLQ AMNTGHEGSL TTIHANSPRH
ALGRLENLVG MDGITLPTKA LRELISSSLD FIIQITRLND GSRKITSIEE IIGMEGDIIT
TQEIFCYKRM GINPDGSVQG MFRATGVRPK VYEKIHTYGI CLSDGMFDPG DND
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