Gene Ppha_0802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0802 
Symbol 
ID6461262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp839404 
End bp839931 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content56% 
IMG OID642727055 
Producthypothetical protein 
Protein accessionYP_002017709 
Protein GI194335915 
COG category[S] Function unknown 
COG ID[COG4655] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATACGGT CACACTCCAT CACCAAACGG CTCTACGGCC AGCGTGGCAC TGTCGTCATT 
TTGTTTGCCC TGCTCTTGCC GGTATTGCTT GGTTTTGCCG CTTTGGCGAT TGACTTGGCC
CGTCTCAGCC TGACCAGGGT TGAACTTCAA AACGCGGCCG ATGCTGCCGC TTTGGCTGGC
GCTCATTCAC TCGGCGATGT GCTGTCACCT CATTGGACTT CGGCTGCGGA CACTGCGCTG
GTCTGGGCAC AACACAACGT CGCCTATGGC TCAAAGATTA AGGATGCGAC CATTGAAACG
GTTTACTGGC CCAGTATGCG TCCCTCAACC AGCGCACCCG TTGCTGGAGA TGCCCCCGCT
ATACGTGCGA TGATTACTAT CGACAGTACC CATAATTGCG GGCCTTGCAA GTTCTTTTTC
GCCCCCTTTC TGGGTATTGC CATCAAAGAC GTTCAAGCCA GCGCCATTGC CGTGCTACTC
AAACCCACCG GGGGCGGTGG CGCCTCCATA CCCAAACTGG TACAATAA
 
Protein sequence
MIRSHSITKR LYGQRGTVVI LFALLLPVLL GFAALAIDLA RLSLTRVELQ NAADAAALAG 
AHSLGDVLSP HWTSAADTAL VWAQHNVAYG SKIKDATIET VYWPSMRPST SAPVAGDAPA
IRAMITIDST HNCGPCKFFF APFLGIAIKD VQASAIAVLL KPTGGGGASI PKLVQ