| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0801 |
|---|
| Symbol | |
|---|
| ID | 6461265 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | + |
|---|
| Start bp | 838982 |
|---|
| End bp | 839407 |
|---|
| Gene Length | 426 bp |
|---|
| Protein Length | 141 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 642727054 |
|---|
| Product | TadE family protein |
|---|
| Protein accession | YP_002017708 |
|---|
| Protein GI | 194335914 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4961] Flp pilus assembly protein TadG |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATCA TGCACGCAGA TATGCCCCTG CTCAAGGCCC CGGAAAAGGA GCAGGCTCAA
TCCCAAAAGG GCTATGCGAC TGTCGAATTT ATGCTTCTCC TGCACTTGTT TCTGCATATT
CTCCTTGGGA TATTTTTTTA TTCTATTGCC CTGTTAGACA AAATTGTGCT TACCAATGCC
AGCCGGGAAG GCGCACGTGC CGGAGCCATT AGCTCCAGCA CCATTAGTGC CCAAACAGCT
GCCGCATCGG GCTGCGACTG CAAACTCATT TCAATGTATG GCACCCTAAG CGCCACCATT
ACACCGACTG TAGATAGCAG TACCAATATG TGTACAGTTG AGACCCGTTG CTATTACCCA
CCAGTTTATA TTTTTCCAGG CATTGACCTC TCGGCCACAA CCAGCATGAG GCTTGAATCT
CCATGA
|
|---|
| Protein sequence | MSIMHADMPL LKAPEKEQAQ SQKGYATVEF MLLLHLFLHI LLGIFFYSIA LLDKIVLTNA
SREGARAGAI SSSTISAQTA AASGCDCKLI SMYGTLSATI TPTVDSSTNM CTVETRCYYP
PVYIFPGIDL SATTSMRLES P
|
|---|
| |