Gene Ppha_0778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0778 
Symbol 
ID6461320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp810963 
End bp811964 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content47% 
IMG OID642727032 
Producthypothetical protein 
Protein accessionYP_002017687 
Protein GI194335893 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACATA AAACAATCCT TTTCCTCTAT GCCGCACTTG TAACATTCAT TCTCATTCTG 
GTTGTTTTTA CCGTAAACCA GTTGAGTGCG GCAGCCTCCC TCCTCAGCTT GCTGCATCCT
TTTGCCGGAA CCCTTTTTCT GCTCTTCAGC GCGGCCTGCA TACTTTTTGC ACTCTACAGC
GGCTTCAAGC TTTTTGCTGC CCCGAAAAAG GCCGTACTGC CGAAAAACGG AAACTCGAAA
AAGATGATAG CTTACACAGA ATTTCTGCTC TCCCGCTTAC CGGTTCATCC CATGCATCAG
GAGCCGTTAA CAAAGAAAAA AGATCAAAAG TGGGTACGTA CCAACCTCAG ATTTATTGAA
GTGGACGCAA ACAACACCAT AAAACAGATC GCCACAAAAA ACTTTTTTGT AGGTGCGTTT
GCCCAGAATA CCTCCTACGG AACAACCACC TCCCTTATGA ACATCCTTAA GGTGGTCTGG
AAAATCTACG TTATGCACAC CCGCGAGCAA CAGCTCAGGG AGTTTATCTC ACTCATTCGC
TCCGTATACG GTTGCCTCCC ACTTTCCGAT TTCAAGAAGG AGGATATCCC TGCCCACATC
AGGCCAATCA TACAGTCTTC GTTCAGCAAT ACCCTTTCAA CACTCTTGCC AGCAGGAAAC
CTGCTGAGCC CGTTTTTTCT CAACCTCTTC ATAGCCGGAT CGACAAACAC CTATCTCACC
TGTCTAGCGG GTATTATCGC AACACGCCAC TGCCAGATCA TGACGGAAGA AGACAAAAAA
GAGATTATCC AGCAAAGCAT GTTTGAAGCA TCATTCATGC TGAAAGAGAT TGTCAGGGAG
TGCAACCCGA TTCTCTCAGT CACCATCAGC CAAGCCGTAA AAAAAGCAGG TATCGAAAGT
CTTGATACGA TCCACCCCCC TTCGACAGGA AGCGGTATGG CCCAGGACAT CGTCTCCCAC
CTTGCAAGTT CGCTGAAAAA CATGCTTAAA GACAATGGAT AG
 
Protein sequence
MRHKTILFLY AALVTFILIL VVFTVNQLSA AASLLSLLHP FAGTLFLLFS AACILFALYS 
GFKLFAAPKK AVLPKNGNSK KMIAYTEFLL SRLPVHPMHQ EPLTKKKDQK WVRTNLRFIE
VDANNTIKQI ATKNFFVGAF AQNTSYGTTT SLMNILKVVW KIYVMHTREQ QLREFISLIR
SVYGCLPLSD FKKEDIPAHI RPIIQSSFSN TLSTLLPAGN LLSPFFLNLF IAGSTNTYLT
CLAGIIATRH CQIMTEEDKK EIIQQSMFEA SFMLKEIVRE CNPILSVTIS QAVKKAGIES
LDTIHPPSTG SGMAQDIVSH LASSLKNMLK DNG