| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0769 |
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| Symbol | |
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| ID | 6461332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 801825 |
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| End bp | 802793 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642727023 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002017678 |
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| Protein GI | 194335884 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.100875 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTAGCC GCAACAAACT GGTATGGGGC ATTGTGGTTG CCCTCATGAT GCTCGGAGCC
ACCGGGTTCT GGTATTTCAC AAGCAACAGG AGTGAGAAAA AAAACTTCGA AGAAGTTCGT
CCTTCACGAG GAGCCATCAG TTCATCAGTA TCAACAACCG GTGCCGTTGA GCCACAAACC
CGAGTTAAAA TCCAGTCCTC AGTTGGCGGG AGAATCGAAG CAATACTTGT AGAAGAGGGG
CAGCTCGTAA AGAAGGGAGA GGTACTTGCC ATGCTCAGTT CAACCGAGCG GGCTGCGCTG
CTTGATGCTG CCAAATTGCA GGGAAAAAGT GAGCAGAGCT ACTGGCAGAA AGTCTATAAA
GAGACTGCGG TGATTGCGCC GATGACAGGG CAGGTGATTG TGCGCAGCGT TGACCCCGGC
CAGACGGTTA CAACCAATGA TTCGCTTTTC GTTCTTTCAG ATCGGCTTCT TGTCAAGGCT
TACGTTGATG AGACCGATAT TGGACGGGTA AAAGTTGGGC AACGGGCGGT CATCGGGCTT
GATGCCTATC CTGAAATCCG GGTAAATGGG GTTGTTCATC ATATCTATTA CGAGTCGCAT
CTGCAGAATA ATGTGAATAT CTATAATGTC GACGTTGTTC CTGACCGGAT TCCTGATGTG
TTTCGTTCCG GAATGAGTGC CAATGTCAGG ATTATTGTGC AGGAAAAAAG CAATGCATTG
CTCCTTCCGC TCGGAGCTGT ACAGAGCAGG AATGGTAAAA CGGTTGTGCT GCAGCGGAGC
CGTCGAAAGG AAGGTGAGGT GCGCTACAAA GCTGTTCAGA CAGGGATGCA GGATGAGAGC
AAGATTGAGA TTCTGGATGG TCTCTCCGAC GGTTCTGTTG TGCTGCTGCC CGATACATCC
TTTGTGCTTC CCGGAAAAAA AGGAGGCTCA AATCCTTTTA TGCCTCAGCG CACCAGGATG
GGAAGATGA
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| Protein sequence | MVSRNKLVWG IVVALMMLGA TGFWYFTSNR SEKKNFEEVR PSRGAISSSV STTGAVEPQT
RVKIQSSVGG RIEAILVEEG QLVKKGEVLA MLSSTERAAL LDAAKLQGKS EQSYWQKVYK
ETAVIAPMTG QVIVRSVDPG QTVTTNDSLF VLSDRLLVKA YVDETDIGRV KVGQRAVIGL
DAYPEIRVNG VVHHIYYESH LQNNVNIYNV DVVPDRIPDV FRSGMSANVR IIVQEKSNAL
LLPLGAVQSR NGKTVVLQRS RRKEGEVRYK AVQTGMQDES KIEILDGLSD GSVVLLPDTS
FVLPGKKGGS NPFMPQRTRM GR
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