Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0768 |
Symbol | |
ID | 6461335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 800561 |
End bp | 801832 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642727022 |
Product | outer membrane efflux protein |
Protein accession | YP_002017677 |
Protein GI | 194335883 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.151036 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGATTAA AAATATATCG GGTTCTGCTT CTGCTGTTTT TTCTTCCCTT TTTGGCTTTG CCGTTGCAGG GGGAGGAGGT GCTGACCTGG CAGCAATGTG TCAGCGAAGC GCGGGATGCA CATCCTGATC TCTATTCAGC TTTGGCGATT CTGCAGCAGG CTGAAGCAGA TAAGCAAATT GCGGGGGGTT CACTTCTCCC ACAGGTCGCT TTTGGTGTGA GCTCACAGGG GAGTGGCACG ACGGCAAAGG GGGGAAGTTT CTCTTCATCA TACTCTTATT TCTTGTCGGC GCAGCAGCTT CTTTATGACG GGCATAAAAG CTCAAACCAG GTTTCCCAGA CCAAAGAGGT GATCAAAGGC GCCCAATACA ACTATCGTGT GGTCTCCGCC GATCTTCGTT TTGCCCTCCG TTCAGCCTTT ACGCAGTTAC TGAAAGCCCA GGAACTTGTC GGCCTTGCCG GTGAAATCGC CGCGAGGCGT CAGAACAATG TCCGTCTGAT CAATCTTCGC TATCAGGGTG GTCGTGAGCA CATCGGTTCA CTTCGCCAGG CTGAAGCCGA TCTTGCCCAG GCGCAATTCG AAGTCTCCCA AGCCAGACGG GGATTGGTGT TTGCACAGAC AACCCTGGCT TCAGCGCTTG GTCGTGACAA CCATCAACCG CTCAAGGTTC ATGGCGCATT CCAGGCAACT GATTTTTCAG CCGCCAAACC TGATCTTGCC CTTCTTGCCA AAAATAACCC CTTCTTCCAG CAGCTCGATA CCAAAAGCAA AGCAGCTCGA TATGATCTTG CTGTCGCAAA AAGTGCTTTT TTGCCGCAAC TTTACCTGAC TTCATCGATA GGAAGTGGTT CCGTTGACCG ATTGCCTTTT GATGCCGTGG ACTGGAATGC AGGAGTGACG GTTTCCGTGC CTATCTATGA GGGCGGTAGT GGACAGGCTA AGGTAGCAAA AGCCATGGCG GTGGTGAGCC AACACAACGC CGAAGAAAAA AGTGGCTATC TGCAACTCTA TGACTACCTT GAACAGAGCT GGAAAAGTTT TCTTGATGCA CGCCAGATGG TTGTGGTGAA GAAAAAGTTT CTTGATGCCG CCATGGAACG CTCAACCATT GCCAACGCAC AATATTCGAA TGGCCTTCTG ATGTTTAACG AGTGGGTGAT TATTGAAAAC AACCTGGTGA ATGCAAAAAA AGAGTTTCTT AACGCCGGAG CAGATCTGCT GATCGCCGAG GCTCAATGGA TTCAGGCAAA AGGAGAAGGA CTGGATGGTT AG
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Protein sequence | MRLKIYRVLL LLFFLPFLAL PLQGEEVLTW QQCVSEARDA HPDLYSALAI LQQAEADKQI AGGSLLPQVA FGVSSQGSGT TAKGGSFSSS YSYFLSAQQL LYDGHKSSNQ VSQTKEVIKG AQYNYRVVSA DLRFALRSAF TQLLKAQELV GLAGEIAARR QNNVRLINLR YQGGREHIGS LRQAEADLAQ AQFEVSQARR GLVFAQTTLA SALGRDNHQP LKVHGAFQAT DFSAAKPDLA LLAKNNPFFQ QLDTKSKAAR YDLAVAKSAF LPQLYLTSSI GSGSVDRLPF DAVDWNAGVT VSVPIYEGGS GQAKVAKAMA VVSQHNAEEK SGYLQLYDYL EQSWKSFLDA RQMVVVKKKF LDAAMERSTI ANAQYSNGLL MFNEWVIIEN NLVNAKKEFL NAGADLLIAE AQWIQAKGEG LDG
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