Gene Ppha_0768 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0768 
Symbol 
ID6461335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp800561 
End bp801832 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content50% 
IMG OID642727022 
Productouter membrane efflux protein 
Protein accessionYP_002017677 
Protein GI194335883 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.151036 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATTAA AAATATATCG GGTTCTGCTT CTGCTGTTTT TTCTTCCCTT TTTGGCTTTG 
CCGTTGCAGG GGGAGGAGGT GCTGACCTGG CAGCAATGTG TCAGCGAAGC GCGGGATGCA
CATCCTGATC TCTATTCAGC TTTGGCGATT CTGCAGCAGG CTGAAGCAGA TAAGCAAATT
GCGGGGGGTT CACTTCTCCC ACAGGTCGCT TTTGGTGTGA GCTCACAGGG GAGTGGCACG
ACGGCAAAGG GGGGAAGTTT CTCTTCATCA TACTCTTATT TCTTGTCGGC GCAGCAGCTT
CTTTATGACG GGCATAAAAG CTCAAACCAG GTTTCCCAGA CCAAAGAGGT GATCAAAGGC
GCCCAATACA ACTATCGTGT GGTCTCCGCC GATCTTCGTT TTGCCCTCCG TTCAGCCTTT
ACGCAGTTAC TGAAAGCCCA GGAACTTGTC GGCCTTGCCG GTGAAATCGC CGCGAGGCGT
CAGAACAATG TCCGTCTGAT CAATCTTCGC TATCAGGGTG GTCGTGAGCA CATCGGTTCA
CTTCGCCAGG CTGAAGCCGA TCTTGCCCAG GCGCAATTCG AAGTCTCCCA AGCCAGACGG
GGATTGGTGT TTGCACAGAC AACCCTGGCT TCAGCGCTTG GTCGTGACAA CCATCAACCG
CTCAAGGTTC ATGGCGCATT CCAGGCAACT GATTTTTCAG CCGCCAAACC TGATCTTGCC
CTTCTTGCCA AAAATAACCC CTTCTTCCAG CAGCTCGATA CCAAAAGCAA AGCAGCTCGA
TATGATCTTG CTGTCGCAAA AAGTGCTTTT TTGCCGCAAC TTTACCTGAC TTCATCGATA
GGAAGTGGTT CCGTTGACCG ATTGCCTTTT GATGCCGTGG ACTGGAATGC AGGAGTGACG
GTTTCCGTGC CTATCTATGA GGGCGGTAGT GGACAGGCTA AGGTAGCAAA AGCCATGGCG
GTGGTGAGCC AACACAACGC CGAAGAAAAA AGTGGCTATC TGCAACTCTA TGACTACCTT
GAACAGAGCT GGAAAAGTTT TCTTGATGCA CGCCAGATGG TTGTGGTGAA GAAAAAGTTT
CTTGATGCCG CCATGGAACG CTCAACCATT GCCAACGCAC AATATTCGAA TGGCCTTCTG
ATGTTTAACG AGTGGGTGAT TATTGAAAAC AACCTGGTGA ATGCAAAAAA AGAGTTTCTT
AACGCCGGAG CAGATCTGCT GATCGCCGAG GCTCAATGGA TTCAGGCAAA AGGAGAAGGA
CTGGATGGTT AG
 
Protein sequence
MRLKIYRVLL LLFFLPFLAL PLQGEEVLTW QQCVSEARDA HPDLYSALAI LQQAEADKQI 
AGGSLLPQVA FGVSSQGSGT TAKGGSFSSS YSYFLSAQQL LYDGHKSSNQ VSQTKEVIKG
AQYNYRVVSA DLRFALRSAF TQLLKAQELV GLAGEIAARR QNNVRLINLR YQGGREHIGS
LRQAEADLAQ AQFEVSQARR GLVFAQTTLA SALGRDNHQP LKVHGAFQAT DFSAAKPDLA
LLAKNNPFFQ QLDTKSKAAR YDLAVAKSAF LPQLYLTSSI GSGSVDRLPF DAVDWNAGVT
VSVPIYEGGS GQAKVAKAMA VVSQHNAEEK SGYLQLYDYL EQSWKSFLDA RQMVVVKKKF
LDAAMERSTI ANAQYSNGLL MFNEWVIIEN NLVNAKKEFL NAGADLLIAE AQWIQAKGEG
LDG