| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0761 |
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| Symbol | |
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| ID | 6461348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 792943 |
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| End bp | 794832 |
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| Gene Length | 1890 bp |
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| Protein Length | 629 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642727015 |
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| Product | outer membrane autotransporter barrel domain protein |
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| Protein accession | YP_002017670 |
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| Protein GI | 194335876 |
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| COG category | [N] Cell motility |
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| COG ID | [COG5571] Autotransporter protein or domain, integral membrane beta-barrel involved in protein secretion |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCATC GAAATTTCGT CACGCTTTTC CGCCGCCATT TTTTGCCAGG GAAGCTTCGA
TACGCCTTGA TGACCGCACT CGCCCTGAGC GCCGCACCTT TGGCTTGCGC TGATGCCCGG
CCATTTTCCT CGATTGTTGC TTTCGGCGAT AGCTATGCCG ATAAAGGCAA CATTCAGAAT
ATCATGGCGA CGATCCCTGC CTACGCAAGT GAACTCGCTT ATATCAACAC GATCTATCCG
ACAGGAAGGT TCAGCGGTGG AACCAATTAT ATCGACACAT TGGTAAGCCT TTATGGCATT
GCTCAGGACA ATTATGCCCT CGGTGGTGCG CAGACCGGAA CAACTAATGA ATTTCCTGGT
CTGCCGGGCT TCACCAGTGA GTGGCAAGGT TTTCTGGCTT CCGGTGATGT CATTGAGCCG
AATGCGTTGG TGACTCTCAA CATCGGTGGC AATGACGCAC GCGTTTATTA TAAAAACGAC
GGCTCAATGG CAGGCGTCCC ATCTGCCGCT ACTGCTTCGG CAGACAACGC GATAACCGGA
ATCAACGCAC TTGTCGGAGC GGGCGCAAAA ACGCTTGTTT TCACCGCTGG CGATGTCTCT
GGCCTCCCCG AGGCAGCAAC CCACCCCGGT TCGGCGGTCG CCGTTGGGTC GGCCTACAGC
CAGACCTATA ATAACCTGAT GCAGCAACAT CTGTCGATAG TGGCAGCCTC AGGCGTTCGG
GTCGAATATG TCGACCTTGC CATGATCGAA TCGAACGTTG TGGCCAATCC GTCGCTTTAC
GGACTGCAAT ACGCAACGGC TGCTCCGACA TCCAACATGG GTGATCCAGC CCTGATAAAC
CAATATTTTT TCTACCTCGA TAAGGTGCAT CTGACTTCGG CCGGCTTTAC CATTGTGGCA
GAATACATTG CCAATCGCCT CAACGCCCCT GAGACATTCC CCGCAACCTG CGAGCTTGGG
TTGAGTGCAG CGGACGCCTT TGTCGACACC ATGTTCGGCC AACTTGATCT GTTCAACGTT
ACGACCGCGA AAAACTCCGC CACCCCAGGA ATCGGGTCAA ACTCATGGTC CCTCTTCGTG
CAGGGCAATG GCGTTGTATC CAATCGTTCC TCCAGCGACA ATTCGCAAGG GTATCATTCG
GATGACCTCG GCACAACGCT CGGCATAGAG TATCGCCCGA CCTCCGAGAC CATGGTTGCC
ACGGCCTATC GTTTTGCAAA TCCCTCTCTG AACCTGAGCC AGAATGACGG AACCACCAGC
GCAGAGGTCA ACCAGCTTGG ACTCTATGGT ACCTATACAC AGAAAAACCT CTTCCTTCAG
AGCCTGCTCG CTTACGGTTG GCTGAATTAT TCCAACAGCC GTTCCGGCGT TGTCAGTACC
ATCACCGCCA AGCCGGACGG TGAAACGTTC GCTGCGGCAT TGAAAGGTGG CTATCTTTTT
GACGTCGCCC CGTCATTGCG GCTCGGCCCA ATTGCAGGAC TCACCTATGT TCAGGCACAT
ATTGACGGTT ATAGCGAAAA TGGCGATCCA GCTCTCACGC TCAATCTGTA CGAACAAACT
GCCAAAACCG TACTCGGTAG TGTAGGTGCA CAGGCTCGCT GTGCTTTCGA CCTGGGAAGC
ACGAAGCTCG ACTCCTATCT GAACGTCACC GTTGAAAACA ATTTCGAAGG CTCAGACCGT
ATCATCCAAT ACAGCGCCAC CTCTGCGCCG CTGATCGTCA ATTCATGGAC AACGACAGGC
GCATCGAACC ACGCTTTCGT CCGCCTCTCT GCTGGCGCCG ATGCCGATCT GACAAGCGCC
ATCTCCGTCA TGCTGAACCT GTCGCAGACA ATCGGGCAAC CGGGAGGAAA TGACTTTTTC
TACACGGCTG GCCTGAAATA CTCATTCTGA
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| Protein sequence | MSHRNFVTLF RRHFLPGKLR YALMTALALS AAPLACADAR PFSSIVAFGD SYADKGNIQN
IMATIPAYAS ELAYINTIYP TGRFSGGTNY IDTLVSLYGI AQDNYALGGA QTGTTNEFPG
LPGFTSEWQG FLASGDVIEP NALVTLNIGG NDARVYYKND GSMAGVPSAA TASADNAITG
INALVGAGAK TLVFTAGDVS GLPEAATHPG SAVAVGSAYS QTYNNLMQQH LSIVAASGVR
VEYVDLAMIE SNVVANPSLY GLQYATAAPT SNMGDPALIN QYFFYLDKVH LTSAGFTIVA
EYIANRLNAP ETFPATCELG LSAADAFVDT MFGQLDLFNV TTAKNSATPG IGSNSWSLFV
QGNGVVSNRS SSDNSQGYHS DDLGTTLGIE YRPTSETMVA TAYRFANPSL NLSQNDGTTS
AEVNQLGLYG TYTQKNLFLQ SLLAYGWLNY SNSRSGVVST ITAKPDGETF AAALKGGYLF
DVAPSLRLGP IAGLTYVQAH IDGYSENGDP ALTLNLYEQT AKTVLGSVGA QARCAFDLGS
TKLDSYLNVT VENNFEGSDR IIQYSATSAP LIVNSWTTTG ASNHAFVRLS AGADADLTSA
ISVMLNLSQT IGQPGGNDFF YTAGLKYSF
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