| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0738 |
|---|
| Symbol | |
|---|
| ID | 6461404 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | - |
|---|
| Start bp | 771965 |
|---|
| End bp | 772465 |
|---|
| Gene Length | 501 bp |
|---|
| Protein Length | 166 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642726995 |
|---|
| Product | protein of unknown function DUF985 |
|---|
| Protein accession | YP_002017650 |
|---|
| Protein GI | 194335856 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3542] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAAAG CTGAGTTCTG GATTGAGAGC CTTCAACTTG TGGCGCATCC GGAAGGGGGA
TACTACCGGG AAACCTGGAG GAGCGAAGGC GGCTATTCCT TCCCGGATGC ATCTCCCTTC
AATGGCCCAC GCTCTTATGC AACGGCCATT TACTACCTAC TCAAAAGCAC GGATCGCTCA
AAACTACACC GCATTCATTC CGACGAACTC TGGTTTTTCC ATGCAGGCGA TCCCCTCACC
GTGCATTTTT TCCCTCAGGA TGGTGATCCG TCAAGCTTTA CGCTCGGCCT CTCGCCGGGT
ATGGGGCAGG TTCTGCAGGG AGTCGCCCCC AAAGAGAGCT GGTTTGGCGC CTGTTGTGAA
AATCCGGGTG AAGAGAGCTA TGCGCTGGTC AGTTGCGTCG TCGCGCCCGG TTTTGATTTT
CGCGACTTTG CTTTCGCCGA CAGGGAGATG TTACAAAAAA AATACCCCCG ACATGCTGAA
CTCATCATGC GTCTCACCTG A
|
|---|
| Protein sequence | MQKAEFWIES LQLVAHPEGG YYRETWRSEG GYSFPDASPF NGPRSYATAI YYLLKSTDRS
KLHRIHSDEL WFFHAGDPLT VHFFPQDGDP SSFTLGLSPG MGQVLQGVAP KESWFGACCE
NPGEESYALV SCVVAPGFDF RDFAFADREM LQKKYPRHAE LIMRLT
|
|---|
| |