| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0728 |
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| Symbol | |
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| ID | 6461426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 759818 |
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| End bp | 761713 |
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| Gene Length | 1896 bp |
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| Protein Length | 631 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642726985 |
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| Product | DNA primase |
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| Protein accession | YP_002017640 |
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| Protein GI | 194335846 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0358] DNA primase (bacterial type) |
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| TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCCTC CGGCAATCGT TGATGAGGTC CGACAGGCGG CTGATATTGT TGAGATTATC
TCTGATTACC TCACGCTGCA GCCTGCAGGA CATAACTATA AGGCCCTCTC TCCCTTTACG
AGGGAGAAAA CACCGTCGTT TGTTGTTTCA CCCGACAAGC AGCTCTTCAA ATGCTTTTCA
AGTGGAAAGG GGGGGAACGT TTTCAACTTT GTCATGGAGG TGGAAAAGCT CTCCTTTCCG
GAGGCGGTTG AACTGGTTGC CCGCCGATCG GGCATGGACA TCAGCCGATT TACCGAAAAA
AAAGAGCAGA AATCGGCGCA TGAAGAGAGC CTGACTGAAA CGCTCCGCTG GGCTGCAAAA
TTTTTTCGCG GAACGCTGGA AAGTGATGCA GGAAAGTTGG GCTCGATCTA TCTTGCAGAA
AAGCGGGGCT TGTCGGAAAA AACGATTAAA ACATTCGGCC TCGGTTATGC GCCCGATGCA
TGGGATCACC TCTTCACTGC GGCAAAACGG GCTGGCATAC CACAGAAGCA CCTGCTTGAT
CTCGGACTTA TATCGGCAAA CAAACAGGGC AACTCATGGT TCGATACCTT CCGCCATCGA
GTGATCTTTC CTATTTTTTC AGTCGGTGGC CAGGTCGTCG GTTTTGGTGG ACGCACCCTT
GAGAGTGACC CCAAGGCACC GAAATACCTT AATTCGCAGG AGAGCAAGCT CTTTGAAAAA
TCAAAACTTC TTTATGGACT TCACGCTGCA AAAAATGAGA TTCGGCGCAT GGAGAACGCC
CTGCTCGTTG AAGGATATAT GGACGTTCTG GCCCTGCACC AGGCGGGCAT GACCAATGCA
GTAGCCTCAT GCGGCACCTC ACTGACACGT TACCAGGCAA AAATCCTCCG ACGTTACACC
AGCAGGGTTC TTTTCATGTA TGATGCTGAC CGTGCCGGCC AAAAGTCAAT GATGAGCGGT
ATCGACATCC TGTTGGCAGA GAACCTCACC CCTTTTGTCA TCATACTTCC CGAAGGTGAC
GATCCCGACA GTTTTGTCAG CCGTGAAGGG AGAGAAAAAT TTCTGCGGTT TACAGAAGAG
AAGATGCTTT CGTTTCAGGA TTTTCAGATC CGTTTTTTCC GGGAATCGGG AGACTTTGCA
GAACCTGACC TGAAATCAAG AGCGATCAAG GTGATGACAC ACACGATTGC GCAGATCCCC
GACCGAATCC GGCGCGAACT CTACCTTCAG GAGCTGTCGA AAAAGCTTGG TCTGACTCTC
TCAGCTCTTC AGGAGTTGCT CGAAAAAGAG GAGGGTGCAA CAGAAAACAA GAGGTTGTCG
TCCGAAAACC GTCAGGAACT TCCACCTCCA GGCAAACCGG CGCCAAAGAT CTCGGTACTT
GAAAAAACCT TTTTGAAAGC GCTGCTTGAA AGTACCGGCT ATGGAAATGC GGTGCTTGAA
TTTGCAGCCT CGCACGAAGA GATGCTGGAG CTGCCACACC ATGAAGCTCA GGAGATTTTT
ATCCATCTCA TCCGGCGCTA CCACGACATC GCCGATCGTC CTGACGAACG GATTAACATT
GCGTCTGAAA TAAGTTCGTT CGGAACTCCT GAGTCACGGG ATCTCGCTTC GGAATTACTG
ATTGAACAAC CGATCAGCAA GAAGTGGCTC GAACAATCCA ATGTACACGC TGATAACGCA
AAACGATGCC TTGCGATGTT CCTTGATGCG TTCAAAAATC TTATTCTTGA ACCGCTGCTC
TGTCAAAAAA ACAGATTGAC TGAGGATATC CGTCTTGAAA GCGATACCGA TCGTGAAATA
GAGCTCTTGA GGGAAAAAAT CATTCTTGAT AAGAAAATCC GGAAAACCTC CCTTGACCTC
AAAAAAATGA TCACTGCCAT TCTGGAAGAG AGCTGA
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| Protein sequence | MIPPAIVDEV RQAADIVEII SDYLTLQPAG HNYKALSPFT REKTPSFVVS PDKQLFKCFS
SGKGGNVFNF VMEVEKLSFP EAVELVARRS GMDISRFTEK KEQKSAHEES LTETLRWAAK
FFRGTLESDA GKLGSIYLAE KRGLSEKTIK TFGLGYAPDA WDHLFTAAKR AGIPQKHLLD
LGLISANKQG NSWFDTFRHR VIFPIFSVGG QVVGFGGRTL ESDPKAPKYL NSQESKLFEK
SKLLYGLHAA KNEIRRMENA LLVEGYMDVL ALHQAGMTNA VASCGTSLTR YQAKILRRYT
SRVLFMYDAD RAGQKSMMSG IDILLAENLT PFVIILPEGD DPDSFVSREG REKFLRFTEE
KMLSFQDFQI RFFRESGDFA EPDLKSRAIK VMTHTIAQIP DRIRRELYLQ ELSKKLGLTL
SALQELLEKE EGATENKRLS SENRQELPPP GKPAPKISVL EKTFLKALLE STGYGNAVLE
FAASHEEMLE LPHHEAQEIF IHLIRRYHDI ADRPDERINI ASEISSFGTP ESRDLASELL
IEQPISKKWL EQSNVHADNA KRCLAMFLDA FKNLILEPLL CQKNRLTEDI RLESDTDREI
ELLREKIILD KKIRKTSLDL KKMITAILEE S
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