Gene Ppha_0719 details

Gene Information

• Locus tag: Ppha_0719
• Symbol: ispF
• ID: 6461463
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelodictyon phaeoclathratiforme BU-1
• Kingdom: Bacteria
• Replicon accession: NC_011060
• Strand: -
• Start bp: 748532
• End bp: 749005
• Gene Length: 474 bp
• Protein Length: 157 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 642726976
• Product: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• Protein accession: YP_002017631
• Protein GI: 194335837
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• TIGRFAM ID: [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTATTG GAATTGGTAT CGATGTACAC CCTTTTGCAG AGGGCCGAAA GCTTGTGATC 
GGAGGCGTTC ACATCCCCGG ACATAATGGA CTTGACGGCC ACAGCGATGC CGATGTTCTG 
CTTCATGCCG TCAGTGATGC CCTGCTTGGT GCAGCAGCCC TGGGAGACAT CGGGTTGCAC 
TTTCCCAACA CAAGCCAGGA GTTCAAGGAT ATCGACAGCA TGATTCTGCT TAAACAGGTC 
AGAAAGCTGC TTGAAAAGCA TGGTTACCAG ACGGTTAACA TCGACGCCAT GCTGCTTCTT 
GAAGAGCCCA AAATTGCCCC CTACATTACC GGGATGCGCA AAAACATTGC ACGCTGTCTC 
GATATTGAGA TCGGAATGGT CTCGGTCAAA GCTACCACCA ATGAAAAACT GGGCTACATC 
GGACGTGAAG AGGGAGCGGC GGCACATGCC GTCTGCATTA TCCGTTCGCT CTAA 

 

Protein sequence

MRIGIGIDVH PFAEGRKLVI GGVHIPGHNG LDGHSDADVL LHAVSDALLG AAALGDIGLH 
FPNTSQEFKD IDSMILLKQV RKLLEKHGYQ TVNIDAMLLL EEPKIAPYIT GMRKNIARCL 
DIEIGMVSVK ATTNEKLGYI GREEGAAAHA VCIIRSL