Gene Ppha_0716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0716 
Symbol 
ID6461468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand- 
Start bp744856 
End bp745767 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content51% 
IMG OID642726973 
Productbranched-chain amino acid aminotransferase 
Protein accessionYP_002017628 
Protein GI194335834 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID[TIGR01122] branched-chain amino acid aminotransferase, group I 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.470563 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAGT CTGCTAAAAT CTGGATGAAC GGCGAACTGA TTGACTGGAT TGACGCGAAA 
ATCCACATTC TGTCCCATGT TGTCCATTAC GGTTCATCTC TCTTTGAAGG AATCCGCTGC 
TATGAAACCC TGAAGGGTTC AGCAATTCTT TTTCTCGACG AACATATCAA ACGCCTCAGA 
GACTCGGCTA AAATATACCG TATTGAAATT CCATACTCCG AAAAAGAGCT GAAAGAGGCC 
ATCATCAGCA CCATCCAGGC CAACAATCAC AAATCATGCT ACATCCGTCC GCTGGTCTAT 
CGCGGGCAGG GAGCTCTGGG AGTCAACCCG CACCGTGCCT CCATTGAGGT CGCCATTGCT 
ACCTGGGAGT GGGGAACCTA TCTGGGAGAA GATGTGCTTG AAACCGGTGT TGACGTCCGC 
GTCTCCTCGT GGAACCGCCC GGCCCCCAAC ACCCTTCCGG CATGGGCAAA AGCGGGTGGC 
AATTACCTGA ACTCCCAGCT CATCAAAATG GAAGCGCTGA TGGACGACTA TGCAGAAGGG 
CTTGCACTCG ATGTGAACGG TTATGTTTCC GAAGGAAGCG GCGAAAACAT TTTTGTCGTT 
CGGGATGGCA TCATCTATAC CCCCATGTCG GGTCAGTCAA TACTTCCCGG CTTTACCCGT 
TACGCCATCA TGCACATTGC AAAAGAGCAT GGCTACGAAG TTCGTGAAAC ACTGATTCCC 
AGGGAAGCGC TCTATATTGC TGACGAGATC TTCCTGACCG GCACAGCGGC TGAAATCACT 
CCAGTCAGAA GCGTCGATAA ATACCCGATC GGCAATGAAA AACGGGGCCC GATTACCGAA 
ATCCTGCAGG CGAGTTATCT TAAAATCGTC CAGACCGGTG AAGATCCCTA CAACTGGCTA 
ACCTTTATCT GA
 
Protein sequence
MNKSAKIWMN GELIDWIDAK IHILSHVVHY GSSLFEGIRC YETLKGSAIL FLDEHIKRLR 
DSAKIYRIEI PYSEKELKEA IISTIQANNH KSCYIRPLVY RGQGALGVNP HRASIEVAIA 
TWEWGTYLGE DVLETGVDVR VSSWNRPAPN TLPAWAKAGG NYLNSQLIKM EALMDDYAEG 
LALDVNGYVS EGSGENIFVV RDGIIYTPMS GQSILPGFTR YAIMHIAKEH GYEVRETLIP 
REALYIADEI FLTGTAAEIT PVRSVDKYPI GNEKRGPITE ILQASYLKIV QTGEDPYNWL 
TFI