| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0696 |
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| Symbol | |
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| ID | 6461519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 720629 |
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| End bp | 721375 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642726953 |
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| Product | RNA methyltransferase, TrmH family, group 3 |
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| Protein accession | YP_002017608 |
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| Protein GI | 194335814 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0566] rRNA methylases |
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| TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGACGCGG AACATTCCGA AAACATTGTC TATGGCAGGA ATGCCGTACT TGAGCTTCTC
CAGCAAAAGC CCGAAAGTAT TGAGAAGATC TATTTTCAGT TTAACACCTC TCATCCAAAA
CTGAAGGAAA TTGTTATTAC CGCAAGGCGG CTGAAGCTGG TGAGCGGCAA AGCCCGGCTT
GAAAAACTTT CCCTTATTGC CGGCACAACA AAGCACCAGG GAGTTTGTGC TCTTATCAGT
TCGGTCACCT ACTACTCGCT TGAAGAGGTG CTGGCAACTC CCCGCAATAC CTTCCCGCTT
CTTGTGGTAC TGCAGGGGCT TGATGATCCC CACAACATCG GAGCCATAAT AAGAACTGCT
GAAGCTGTGG CTGCCGATGC AGTTGTGCTT GTTGAAGGAA AGGGCTCTCC TGTTAATGCT
GTCGTTCACA AGGCCTCAGC CGGAGCGCTC TCTCATATGA GAATTTGCAA GGTAAAAAGC
CTTGTGCGTG CCCTTGAACT TCTGCATCAA TGCAATGTTC AGGTTCTTGC GGCTGATATG
GAAGCAGAAC TCAATTATAC CGATGCCGAC ATGAAAAAAT CGACAGCCAT TGTGCTTGGT
ATGGAAGGGA GCGGTATTGC ACCTGAAGCG CTGCAATTCT GCGATCATGT TGTCCGCATT
CCCATGGCAG GCTGCGTTGA ATCCCTGAAT GTCAGTGTGA CGGCCGGTGT GCTGCTTTAC
GAAGCCATGA GGCAGCGGCT TGCATGA
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| Protein sequence | MDAEHSENIV YGRNAVLELL QQKPESIEKI YFQFNTSHPK LKEIVITARR LKLVSGKARL
EKLSLIAGTT KHQGVCALIS SVTYYSLEEV LATPRNTFPL LVVLQGLDDP HNIGAIIRTA
EAVAADAVVL VEGKGSPVNA VVHKASAGAL SHMRICKVKS LVRALELLHQ CNVQVLAADM
EAELNYTDAD MKKSTAIVLG MEGSGIAPEA LQFCDHVVRI PMAGCVESLN VSVTAGVLLY
EAMRQRLA
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