| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0691 |
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| Symbol | |
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| ID | 6461531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 711108 |
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| End bp | 712910 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642726948 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_002017603 |
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| Protein GI | 194335809 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAAC AAGGTACAAA GAGGATTTTC GCGACCTGCA GGCTTGGATG CGGCCTGTTG
CTTGCTGCGT TTGTGCTTTT TCTCTCTTCC TGCAACCGCC ACAACGGAAG TTCCGGTGAG
GCTGGAACAA GAGGTGGGGC AATGGATTCC ACACTTGTTA TTGCCATGCT TGGTGATGCC
GATTATCTTA ACCCCGTGCT TGGCAGCACC GTTACTTCAG GCAATATTAT TGGACTTATC
TATCCATCTC TCTTGCAGAG TGAGTTTGAC ACCTCGACCG GGCTTTTGAA CTATATGGCT
CTTGAAAAAA AACTGCGGGA AGTAATGCCC GGTCAGGGGA AAAAAACACC GAAAGGGGCC
ATTGCAAAGA GCTGGCAGAT GTCGGCGGAT CAGAAATCCA TTACCTACAT TCTCAGAAAT
GATGCTTTCT GGAATGACGG CAAGCCTGTT GTTTCAGGGG ATTTCAAGTT TTCCTACCAG
TTGTATGGCA ATCCGGTGAT CGCCAGCGCC CGTCAGCAGT ACCTGGCTGA GTTGGTTGGT
GCCGACAAGG GAAAGGTTGA TTTCGACAAA GCCATTGAGA CTCCTGACGA TACCACCCTT
GTCTTCAGGT TTTACAAGCC TGTTCCGGAA CATCTGGCAC TTTACCATAC ATCATTGACG
CCCCTTCCGG CTCATCAGTG GAAAAATGTC AAGCCTGACG AATTCCGTCA CTCACCGCTT
AATCTCGAAC CGCTTGGGGC AGGCCCCTAT AAACTGAAGA GCTGGAAGCA GCAGCAGGAA
ATTGTACTCG CATCAAGCCG GAGCTCGAAT CTCCCGAAAC CCGGAACCAT TCCGCTGATT
ACCTTCAGGG TTGTGCCCGA TTATACGGTC AGGCTGGCGC AGCTTCAGAC CGGTGCGGTG
GATGTTGTTG AAAATATCAA ACCGGAAGAT TTTACGGCTC TTCTGAAGGC CAATAGGCAG
ATTGATGTCA AAACGATTGG TCTGAGGGTC TATGATTATG TTGGCTGGTC AAATATCGAC
CAGAATGAGT ATCACAAAAG TGGCAGGGTC ATGCCTCACC CCCTGTTCGG TTCGGCGCGT
GTTCGGCTTG CCCTGACGCA AGCCATTGAC CGCGAAGCGA TCATTGACGG CTATCTCAAG
CAATATGGGG TAATTTGTAA CACCGATATT TCACCATCAC TGAAATGGGC CTATAATGAA
CGGGTTGCGC CGCATGCCTT CGATCCTGCA CGTGCTTCAG CCCTGCTGAA GGCTGAGGGC
TGGACGCCTG GGCCGGATGG TATTTTGCAG AAACAGGGCA GAAGGTTCAG TTTCGTGCTC
TATACCAATG CCGGTAATGC GAGAAGGAAC TATGCAAGTG TTATTATTCA GCAGAATCTG
CGCTCAATCG GTATCGACTG CAAGCTTGAG GTTCAGGAAT CCAATGTCTT TTTTGAAAGT
CTCCAGGAGA GAAAGCTTGA TGCATGGATG GCTGGATGGT CCATTGGTCT GGAGATTGAT
CCTCTTGATG TCTGGGGTTC CGATCTTAAC AAGAGCCGTT TTAATTTTAC CGGTTACCGC
AATCCGAGGA TAGACGAGCT CTGTGAGCTT GCCAAGCAGA AGATGGAACC CACGGGGGCA
AGAGCGTACT GGCTTGAATA TCAGGAGATT ATACATCGTG ATCAGCCGAT CACCTTTCTC
TACTGGATCA AGGAGACGCA GGGCTTCAGC AAGAGGATTG AGGGGGAAGA GCTCAATATT
TCAGGTGCTT TTTATAATAT TGACGACTGG AGGCTGCGTC CTTCAGCCAA TGTTGCACTA
TAG
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| Protein sequence | MSKQGTKRIF ATCRLGCGLL LAAFVLFLSS CNRHNGSSGE AGTRGGAMDS TLVIAMLGDA
DYLNPVLGST VTSGNIIGLI YPSLLQSEFD TSTGLLNYMA LEKKLREVMP GQGKKTPKGA
IAKSWQMSAD QKSITYILRN DAFWNDGKPV VSGDFKFSYQ LYGNPVIASA RQQYLAELVG
ADKGKVDFDK AIETPDDTTL VFRFYKPVPE HLALYHTSLT PLPAHQWKNV KPDEFRHSPL
NLEPLGAGPY KLKSWKQQQE IVLASSRSSN LPKPGTIPLI TFRVVPDYTV RLAQLQTGAV
DVVENIKPED FTALLKANRQ IDVKTIGLRV YDYVGWSNID QNEYHKSGRV MPHPLFGSAR
VRLALTQAID REAIIDGYLK QYGVICNTDI SPSLKWAYNE RVAPHAFDPA RASALLKAEG
WTPGPDGILQ KQGRRFSFVL YTNAGNARRN YASVIIQQNL RSIGIDCKLE VQESNVFFES
LQERKLDAWM AGWSIGLEID PLDVWGSDLN KSRFNFTGYR NPRIDELCEL AKQKMEPTGA
RAYWLEYQEI IHRDQPITFL YWIKETQGFS KRIEGEELNI SGAFYNIDDW RLRPSANVAL
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