| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0670 |
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| Symbol | |
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| ID | 6461571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 690747 |
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| End bp | 692540 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642726931 |
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| Product | signal peptide peptidase SppA, 36K type |
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| Protein accession | YP_002017586 |
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| Protein GI | 194335792 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00705] signal peptide peptidase SppA, 67K type
[TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACAC CAACAAAGAG GCGCGGCTGT TTTCGTAATG GCTGTCTTGC ACTTGTGCTT
CTTCCTCTCC TCATTTTTGC GGGACTTTTC TGGGCTCATC GCAGCTCACA GGCTCTTCCC
GACCGTTTTG TGCTGGTAGT ACCTCTCAGT GGCGGGATCG ATGAGGTACG CAATGAGAGC
AGTTCGCTCC CATTTTTGCC TTCGCATGAG TCACTCTCTC TCCAGGAACT GCTCTTTGTA
CTCAATCATG CCGTTGCGGA CGAGCGGGTC AGGGAGGTGC TTCTTGATAT CCGGGGGATA
CACACCTCTC CCGCCAAGAT CGCTGAACTA CGGGATGCTG TTGAAAAAGT CCGCAAGGGG
GGGAAAAAGG TCACTGCATT TCTTCGCTCA GCCGAGGATG CCGATTATCT CCTTGCGACC
GCATGTAACT CCATTATTGC CGAACGCGGC GGTTTTCTTC TTCTCGATGG GCTGAAGGTG
GAGTCGCTCT TTTATACCAG CCCGCTTGGA AAACTTGGAG TTCAGGTTCA GGCTGCGCAG
TGGAAAAAGT ACAAGAGCGG TATTGAGCCC TTTGTCAGAA CCGGGGCGAG CAAGGAGTAC
CTCGAACAGA TCAATGCGCT GCTTGATGAG TTCTATGATG ATTACCTTGG TTACGTTTCA
AAGCGGCGCG GCATGAGCCG AAGCTCTTTT GAGGCGCTCA TCAACAATGA TCCTCTGGTG
TCGGCCAAAA AAGCCCAAAC GCTCGGACTG GTTGATGGCA TCGCCTCCTT CTGGGAGTTG
CAGCGTCAGT TGACCAGAAA AGTGTCAGGA AAGGAGCTTG CCCGTGATAA CGATGTTTTT
GTCAGTGGAG CCCGCTACCG TTCTGCCGTT GCCTGGCCCC AAAAAGGGGA GAGTGATGAG
CGCATTGCGG TGATCACCAT GTCAGGCATG ATCGTTCACT CGGCAGGGGA GATGGGTGAG
GGTATCGATA TTGAGATGCT GAAAAATTCG CTTGATGCAG CGCTGGAGGA TAAAGCGGTT
AAAGCTCTTG TTGTCCGCAT TGACAGTCCC GGCGGTGATG CCCTTGCCTC TGCAGATATG
CTGCAGATGC TCGACTCGGC TGCTGTGAAA AAACCTCTTG TGGTCTCCAT GTCGGGTGTC
GCCGCTTCGG GAGGCTATAT GGCTGCCCTT GCAGGGAAAA CCATTTTTGC CCAGCCACTG
ACCATTACCG GCTCCATTGG TGTCTATGCC CTTAAGCCCA ACATCAGCGG CTTGGCCGAA
AAAATCGGTC TGGGTCGGGA TGTTGTAACC AGAGGGCAGT ATGCCGATGC CAGCACGCCC
TTCAAACCGC TTGAGGGGCA GGCCTACAAC AAATTTGTTG GAGCATCGGG CGAAATCTAT
GATGATTTTG TCGGGAAGGT TGCCGCATCA AGAAAAATGA GCATTGCCGC TGTGGACTCG
GTTGCCGGGG GAAGGGTCTG GACCGGAAGC CGTGCCATGA AGGCTGGTCT GGTTGACCGT
ATGGGAGGAC TCTTTGATGC CATTCATGCA GCACAACAGC TCGCTAAAAT GGATATGGGC
AAAAAGCTCC AAATCATCCT CTATCCCGAA CAGAAAAGCT GGTTTGAGTC CCTTCTGCAG
GGCAGGAGTG CAAGCCTCTC CGACAGGTTT GCCGCAGCCG TCAAACAACA GGTGCTGCAT
GAACTCCTTC CACAGAGGCA GTTGACCTCC ATGGCCACCT TTTACGAAAT GCTGCTGACA
TCAGGCCAAT TGCAGATGCT CGCCGTCATG CCATCCGACA TCATCATCGA TTGA
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| Protein sequence | MNTPTKRRGC FRNGCLALVL LPLLIFAGLF WAHRSSQALP DRFVLVVPLS GGIDEVRNES
SSLPFLPSHE SLSLQELLFV LNHAVADERV REVLLDIRGI HTSPAKIAEL RDAVEKVRKG
GKKVTAFLRS AEDADYLLAT ACNSIIAERG GFLLLDGLKV ESLFYTSPLG KLGVQVQAAQ
WKKYKSGIEP FVRTGASKEY LEQINALLDE FYDDYLGYVS KRRGMSRSSF EALINNDPLV
SAKKAQTLGL VDGIASFWEL QRQLTRKVSG KELARDNDVF VSGARYRSAV AWPQKGESDE
RIAVITMSGM IVHSAGEMGE GIDIEMLKNS LDAALEDKAV KALVVRIDSP GGDALASADM
LQMLDSAAVK KPLVVSMSGV AASGGYMAAL AGKTIFAQPL TITGSIGVYA LKPNISGLAE
KIGLGRDVVT RGQYADASTP FKPLEGQAYN KFVGASGEIY DDFVGKVAAS RKMSIAAVDS
VAGGRVWTGS RAMKAGLVDR MGGLFDAIHA AQQLAKMDMG KKLQIILYPE QKSWFESLLQ
GRSASLSDRF AAAVKQQVLH ELLPQRQLTS MATFYEMLLT SGQLQMLAVM PSDIIID
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