| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0666 |
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| Symbol | |
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| ID | 6461580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 685791 |
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| End bp | 687977 |
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| Gene Length | 2187 bp |
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| Protein Length | 728 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642726927 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_002017582 |
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| Protein GI | 194335788 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTATTA ACAAAGAAAT TGATCTTGGA CAAGGCAAGA TTATCTCTAT CGAAACCGGT
AAAATGGCAA AACAGGCCGA CGGAGCTGTT GTTGTTCGCC AGGGTGACAC GATGGTCATT
GCAACGGTTG TCTCAAGCAA AAAAACACCA CCCCCCAATC AGGACTATTT TCCACTTCAG
GTAGAATACC GCGAAAAGTA TTCTGCCGCA GGCAAATTTC CTGGTGGTTT TTTCAAACGT
GAAAGCCGCC CTTCAGAGAA AGAGATTCTT TCAGCAAGAC TGATCGACCG TGCTCTCCGT
CCGCTCTTTC CCGATGGCTA TCTCTATGAA ACACAGATTA TTGTTACCGT TATCTCTTCC
GACCAGATCA ATGACGCTGA CGTCCTCGGT GGCCTGGCTG CATCGTGCGC CATCATGGTC
TCCGATATTC CCTTCCAGAA TCCTATGTCT GAAGTTCGGG TAGGCAGAAT CAACGGTCTC
TTTGTCGTCA ATCCTGACAT CAATGAACTG GTAAACAGCG ATCTTGATAT CTGCATCGGC
GGTACGGAAA ACACCATCTG CATGCTTGAA GGGGAGATGA AAGAGATTTC CGAAGCAGAG
ATGCTCGACG CCATCAAATT CGGACACGCA GCCATCCGCA AACTCTGTGC TCTGCAGAGC
GAAATCGCAG CAGAAGTGGC AAAACCAATC CGTCCCTTTA CGCCAACAGT CATTCCGGCT
GAGCTCACTG AAACGGTTCG GGTACTTTGC GAAACCCGCC TCAAGGAGCT CGCCTACACT
CCGCTCAAAA AGGAAGAGCG CGCTGATCAG ACAGCCGCCA TCTACCATGA AATTATAGAG
AGCACCATTG AGCACTTCAA AGCAACATGC AGCAGCGAAG AGTTCTCGAC CGATCCGGCC
AAGGCGCTCT GCATTAACCC GCATATCATT GACGAACAGA TCCACATGGT CGAAAAACGG
GTCATGCGCC ACATGATTCT TGACGACGCA AAACGTCTTG ACGGCAGAGC CCTCGACCAG
GTACGACCAA TAAGCATTGA ACTGGGCATC ATCCCGAGAG CCCACGGTTC GGCACTCTTC
ACCAGAGGAG AGACACAGGC TCTGGTAACA ATTACCCTCG GCACGAAAAA AGATGCCCAG
TCCGTTGACA ACCTGACCAG CAGTGCCGAC AAAAAATTCT ATCTCCATTA TAATTTCCCT
CCCTTCTGTG TCGGTGAAAC CGGAAGGCTC GGAAGTATCG GACGCAGGGA AATCGGACAT
GGCAATCTGG CAGAACGCTC CATCAAAATG GTTGCTCCGA CAGAGGAAGA GTTCCCCTAC
ACCATCCGTA TCGTTTCAGA CATCCTTGAA TCGAACGGCT CTTCATCAAT GGCATCGGTA
TGCGGAGGAA CGCTGGCCCT GATGGATGGT GGTGTTCCGA TTAAAAAGCC GGTATCAGGC
ATCGCCATGG GACTGATCAA GGAGGGAGCC TCATATGCAG TACTCTCTGA TATTCTCGGC
AATGAGGATC ACCTTGGAGA TATGGATTTC AAGGTATCAG GCACCCGTGA TGGTATTACC
GCCTGCCAGA TGGATATCAA AATCGACGGT CTTGACTACC ACATCCTTGA AACTGCCCTT
GAGCAGGCAC GCAGGGGCCG TCTTCACATC CTCGGCGAAA TGGAGAAGGC TATCCCTTCA
ACCCGTCAGG AACTTGCCAA CTTTGCACCA AAACTTACCA GCATCAAGGT GCCGGTTGAC
TGCATCGGCA TGATTATCGG TAAAGGTGGA GAGACTATCC GCAGCATCAC TGAAGAGACC
GGCGCAGAAA TCAATATTGA TGACGATGGA ACCATAACCA TTGCCTGCTC GACCAGTGAG
GGAACAAATG CCGCACTGGC CACCATAAAA AATCTGACGG CCAAGCCGGA AGTGGGTAAT
ATCTATATTG GAAAGGTGCG CGACATTCGT GATGAGCTCG GCGCTTTTGT GGAATTTCTT
CCCAAAACCG ATGGACTGGT CCACATCTCT GAAATATCGA GTGAGAGGGT CACAAAGGTC
AGCGATCACC TCAAAATCGG CGAAAAGGTG AGGGTCAAAC TGGTTGATGT CCGCAAGGAT
TCCCGCACCG GAAAAACCCG TTTTGCCCTT TCCATAAAAG CGGCTGAACA GGATGCACCA
AAAGAGAACG GCGCAGAGAA CAAGTAA
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| Protein sequence | MIINKEIDLG QGKIISIETG KMAKQADGAV VVRQGDTMVI ATVVSSKKTP PPNQDYFPLQ
VEYREKYSAA GKFPGGFFKR ESRPSEKEIL SARLIDRALR PLFPDGYLYE TQIIVTVISS
DQINDADVLG GLAASCAIMV SDIPFQNPMS EVRVGRINGL FVVNPDINEL VNSDLDICIG
GTENTICMLE GEMKEISEAE MLDAIKFGHA AIRKLCALQS EIAAEVAKPI RPFTPTVIPA
ELTETVRVLC ETRLKELAYT PLKKEERADQ TAAIYHEIIE STIEHFKATC SSEEFSTDPA
KALCINPHII DEQIHMVEKR VMRHMILDDA KRLDGRALDQ VRPISIELGI IPRAHGSALF
TRGETQALVT ITLGTKKDAQ SVDNLTSSAD KKFYLHYNFP PFCVGETGRL GSIGRREIGH
GNLAERSIKM VAPTEEEFPY TIRIVSDILE SNGSSSMASV CGGTLALMDG GVPIKKPVSG
IAMGLIKEGA SYAVLSDILG NEDHLGDMDF KVSGTRDGIT ACQMDIKIDG LDYHILETAL
EQARRGRLHI LGEMEKAIPS TRQELANFAP KLTSIKVPVD CIGMIIGKGG ETIRSITEET
GAEINIDDDG TITIACSTSE GTNAALATIK NLTAKPEVGN IYIGKVRDIR DELGAFVEFL
PKTDGLVHIS EISSERVTKV SDHLKIGEKV RVKLVDVRKD SRTGKTRFAL SIKAAEQDAP
KENGAENK
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