| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0655 |
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| Symbol | |
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| ID | 6461609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 671248 |
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| End bp | 674082 |
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| Gene Length | 2835 bp |
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| Protein Length | 944 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642726916 |
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| Product | DNA polymerase I |
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| Protein accession | YP_002017571 |
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| Protein GI | 194335777 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI)
[COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAATC GGCAGCTCGA CTTCTTCCCG CCAGCCAATC CGGAAGAGAG AATCAAGAAC
CCGGCAACCA TCACAAAAAA ACCAGCACTC TTTCTGCTCG ACGGCATGGC CATCGTTTAC
CGCTCCTTTT ATGCCCTGCA ACGGACGGGC ATGACAAGTC AGGAGGGCAT GCCGACCGGA
GCTATTTATG GCTTTGCATC CACATTGCTT AAAATCTTTG AAACCTACAG GCCACAATAC
CTTGCAGCGG TATTTGACAG CAAGGAAAAA ACCTTCCGAC ACGATCTTTA TCCTCTTTAC
AAAGCCAATC GACAGGCGCC ACCCGAAGAT CTCATCATGC AACTTGACGC CATTTTCAAG
CTGCTTGAAG CGTTTGATAT TCCGCTCATT AAAACCCCGG GATACGAAGC GGACGATCTT
ATTGGCACCG CCTCCCGTAA ATTCAGCCCA ATGTGCCAGG TCTATATTGT CACCCCCGAC
AAGGATCTTG CCCAACTGGT CCATGAGGGA GTAAACATCC TCAAACCCGG CAAAAACCAG
AATGAGCTTG AACTGCTTGG GAAAAAAGAG ATTATCGAAC AGTTCGGGGT TCCCCCTGAG
CTTTTTATCC CGTTCCTCAC CCTCACCGGC GACACCTCCG ACAATATTCC CGGAGCAAAA
GGGATTGGCC CGAAAACCGC CATCTCCCTG CTTGACCAAT ACGGTTCCCT GCAGAATATC
TACAACCATC TCGACACGAT CTCCCCGAAA AACCGCCAAA GCCTTGAAGC ATTTCAACCC
ACGCTTGATC TGATAACACA ACTGGTCACC ATACGCACCG ATTTACAGAT CGACGTTACC
CTGAAAGAGC TTGCCTGCGG ATTACCTGAC CCGGCAAAGC TTTTCCCGCT GCTGCAAAAA
CTCGGTCTTA AAACCATTTC CTCAAGAATA TTGGCTCTTT TTGGCGAGCT TCAGCAAGCG
CCCTCAGCAA CAGCTCCGCT CCATGAGGAA CCCTCCTCCC CTTTTCATGA AGAAGAGCCC
GCTCTCCGAT CACCCCGGGA GAATGCCGAC TATGCCCGTA TCGACACAGT CGATAAACTG
ATGGAACTGA TGGAGTCTCT GCACGATGCC CGGCATATTG CCGTCGACAC GGAAACCACC
AGTCTTGACA CCTTTGAAGC CGAACTGGCA GGGATATCGA TCGCGGTTGA AACAGGAAAA
GCGCGATTTA TCTCTTTCGC GCAGAGCGCC CTTGACCGGG ATAAAACAGT CGAAATCCTG
AAACCGCTCC TTGAAAATCC ATCCCTGCCG AAAATTGGCC AGAACCTCAA ATATGACATG
CTCGTTCTCA AAAAATACGG CATAGAGCTC TCTCCTGTTG CATTCGACAC CATGCTTGCG
AGCTATGTGC TCAATCCTGA AGAAAAACAT AACCTTGACG ACCTGGCCGC CCACCACCTC
GGCTACCGAA CGACAACCTT TGATGAATTG GTTGGAACCG GAAAAACAAA ACAGCATATT
TTCGAGGTTG ATCCCGAAAA GCTCTCAGAC TATGCCTGCC AGGATGCCGA TCTTGCTCTT
CAGCTTGAGG GTGTTTTCCG CAAAAAACTC GACGGAGAAA CTGAACTGCT CTGGCTTTGC
GAAAACATTG AGTTCCCGCT GGTCACAGTC CTTGCCGAAA TGGAATATGC CGGCATATGC
ATCGACACCC ACCATCTTGA AAAGGCTTCC GAACGGGTTA AAAAAGAGCT CGAGCTCCTG
ACAGAAACAA TTTATGCTGC AGCAGGCTCC GCCTTCAACA TCGATTCCCC CAAACAGCTT
GCCCATATTC TCTTTGATCT CCTTGCGCTT CCACCAAAAA AGAGAACAAA AACAGGCTAT
TCAACCAATG TTGAAGTGCT TGAGGAGCTT GCGACACTCT TTCCCATCGC ACGTGACCTC
CTCGAATACC GAAGCCTGCA GAAACTCAAG AGTACCTATA TCGACGCCTT GCCAAAAATG
GTCAATCCTC TGACAGGTCG GTTGCATACT ACATTTAATC AATTCATCAC GGCAACTGGC
CGACTCTCCT CTTCCAATCC AAACCTGCAA AACATACCCA TACGCAGTCC CCTCGGCAAA
GAGATACGCA GGGCATTTAT ACCTTCAACA CCTGAAAACT GGCTACTCTC TGCAGACTAT
TCGCAGATTG AACTCAGAAT TGCTGCAGAA ATTTCCGGAG ATCCTCAACT CCTCGAAGCA
TTCCGCAACC GGGAAGACAT TCACACCGCA ACAGCAAAGG TAATTTTCGA CACCGATGAA
ATTACCAGCG ATATGAGACG CAAGGCAAAA GAGGTGAATT TTGGAGTTCT TTACGGCATC
ATGCCATTTG GCCTCTCACG AAGACTCAAT ATTCCCCAAA AAGAGGCCAA GGCCATTATC
GACACCTACA TCTCGAAATA TCCCGGGCTC TTCAAGGCAT TGCAGGAAAT TATTGTAACC
GGAAGGGAAA AAGGGTATGT CACAACGATC CTCGGACGTC GTCGTTATCT TGCTGATCTC
AACAGCAGGA ATACCAACCT GAAAAAAGCG GCAGAAAGAG CTGCCATGAA TACGCCGATT
CAGGGCACAG CCGCTGATAT CATCAAATGC GCCATGAACC TCTGCAGCAG CAGGATGCGC
CATCTGAACA TGAAATCAGT CATGCTTCTC CAGGTACATG ACGAACTGCT CTTTGAAACC
ACTGATGCAG AAAAAGAGCC GCTTTCAAAA CTTGTAGAAC AGGCAATGAT TGATGCAGCA
ATACGTTGCG GACTAAAAAA TGTCCCTGTT CTGGTCGATA CCGGCATTGG AAAAAACTGG
CTGGAAGCCC ACTAA
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| Protein sequence | MNNRQLDFFP PANPEERIKN PATITKKPAL FLLDGMAIVY RSFYALQRTG MTSQEGMPTG
AIYGFASTLL KIFETYRPQY LAAVFDSKEK TFRHDLYPLY KANRQAPPED LIMQLDAIFK
LLEAFDIPLI KTPGYEADDL IGTASRKFSP MCQVYIVTPD KDLAQLVHEG VNILKPGKNQ
NELELLGKKE IIEQFGVPPE LFIPFLTLTG DTSDNIPGAK GIGPKTAISL LDQYGSLQNI
YNHLDTISPK NRQSLEAFQP TLDLITQLVT IRTDLQIDVT LKELACGLPD PAKLFPLLQK
LGLKTISSRI LALFGELQQA PSATAPLHEE PSSPFHEEEP ALRSPRENAD YARIDTVDKL
MELMESLHDA RHIAVDTETT SLDTFEAELA GISIAVETGK ARFISFAQSA LDRDKTVEIL
KPLLENPSLP KIGQNLKYDM LVLKKYGIEL SPVAFDTMLA SYVLNPEEKH NLDDLAAHHL
GYRTTTFDEL VGTGKTKQHI FEVDPEKLSD YACQDADLAL QLEGVFRKKL DGETELLWLC
ENIEFPLVTV LAEMEYAGIC IDTHHLEKAS ERVKKELELL TETIYAAAGS AFNIDSPKQL
AHILFDLLAL PPKKRTKTGY STNVEVLEEL ATLFPIARDL LEYRSLQKLK STYIDALPKM
VNPLTGRLHT TFNQFITATG RLSSSNPNLQ NIPIRSPLGK EIRRAFIPST PENWLLSADY
SQIELRIAAE ISGDPQLLEA FRNREDIHTA TAKVIFDTDE ITSDMRRKAK EVNFGVLYGI
MPFGLSRRLN IPQKEAKAII DTYISKYPGL FKALQEIIVT GREKGYVTTI LGRRRYLADL
NSRNTNLKKA AERAAMNTPI QGTAADIIKC AMNLCSSRMR HLNMKSVMLL QVHDELLFET
TDAEKEPLSK LVEQAMIDAA IRCGLKNVPV LVDTGIGKNW LEAH
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