Gene Ppha_0651 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0651 
Symbol 
ID6461619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand- 
Start bp667197 
End bp667862 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content52% 
IMG OID642726912 
ProductRibulose-phosphate 3-epimerase 
Protein accessionYP_002017567 
Protein GI194335773 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0036] Pentose-5-phosphate-3-epimerase 
TIGRFAM ID[TIGR01163] ribulose-phosphate 3-epimerase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAGCAC CATCGACGCT TCTTGCCCCT TCAATTCTGT CGGCTGACTT CACCCGACTT 
GAACACTCCA TAGATATCGC TACAAAAGCT GGAGCTGACT GGATGCACTG CGACATTATG 
GACGGCAACT TTGTCCCCAA CATCACCTTC GGCCCACTCA TCGTTCAGGC TATTGCATCA 
TGCACACCCA TGATTATCGA CACCCATCTG ATGATAGTCG ACCCGGATCG CTTCATTGAA 
GAGTTCATCA AGGCTGGCTC CCACCAGATA ACCGTTCACC AGGAAGCATG CCCGCATCTC 
CACCGCACGA TTCAGCTCAT CAAAAGCCTC GGTGCAAAGG CTGGCGTCTC CATCAATCCA 
GGAACCTCGT TATCGACACT TGAATCCATC CTGCCAGATC TTGATCTTGT CCTTCTCATG 
TCGGTCAATC CCGGGTTCGG AGGACAGAAG TTTATTCCCT CCTCAATTGG CAAAATCCGC 
CAACTCCATG AGATGCGTCT GAAAGTGAAT CCGGGAATGG TCATTGCCAT TGATGGCGGC 
ATAACGGAAG AAAACGGGCA GGAAGTTGTT TCGGCTGGAG CCGATGCGCT GATTGCTGGC 
ACGGCATTCT TCAAAGCGGC CAATCCAGCA CAAACGGCGG CAAAATTCAG GGCTATGACC 
AGGTAA
 
Protein sequence
MPAPSTLLAP SILSADFTRL EHSIDIATKA GADWMHCDIM DGNFVPNITF GPLIVQAIAS 
CTPMIIDTHL MIVDPDRFIE EFIKAGSHQI TVHQEACPHL HRTIQLIKSL GAKAGVSINP 
GTSLSTLESI LPDLDLVLLM SVNPGFGGQK FIPSSIGKIR QLHEMRLKVN PGMVIAIDGG 
ITEENGQEVV SAGADALIAG TAFFKAANPA QTAAKFRAMT R