Gene Ppha_0646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0646 
Symbol 
ID6461636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand- 
Start bp662339 
End bp662950 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content48% 
IMG OID642726907 
Productprotein of unknown function DUF374 
Protein accessionYP_002017562 
Protein GI194335768 
COG category[S] Function unknown 
COG ID[COG2121] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.00104263 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCTCT CCCCGCTGAT TTCCCGCCAT CTCATTCCCT TTGCACTGAA ACTTCTTTAT 
GCAAGCCTGC GGATATCGGT CATACCAAAA ATAATACAGC TTCCCGACAA AGAGGTCATC 
ATCACCTTCT GGCATGGTAA AATGATCACA GGCTGGCTTC TTGCCCAAAG ACTCTTTCCC 
GAAAAAAAAA TAACTGCTGT GGTAAGCATG TCCGAAGACG GTAAAACTCT TGCCGATACA 
CTTGAACGAC TCGGTTTCTC GCTCATACGG GGTTCAAGCT CAAAAGGGGG TGCCGCAGTC 
AAACAGGCCA TGCAAAAAGC CCTGCAAAAC GGCAATATTG TCGCCCTTAC CCCCGACGGA 
CCACGCGGAC CTGCCAATCA GTTCAAATAC GGCACATTGC GCCTGGCCTC CGAAAACCAC 
TATCCACTGG TTTTTGCCGA AATCCGTCAT AAAAAAAGCT GGACACTCAA AAGCTGGGAT 
CAGTTTGAAA TTCCGAAACC TTTCAGTGAA ACGTCCGTCC AACTCCACCT TATCCATCTG 
CCTGCATTCG AAAACGAAGC AGAGATAGAA TCGTATACAA AGCAACTTGC AATCCAGCTT 
CACCATGCAT AA
 
Protein sequence
MPLSPLISRH LIPFALKLLY ASLRISVIPK IIQLPDKEVI ITFWHGKMIT GWLLAQRLFP 
EKKITAVVSM SEDGKTLADT LERLGFSLIR GSSSKGGAAV KQAMQKALQN GNIVALTPDG 
PRGPANQFKY GTLRLASENH YPLVFAEIRH KKSWTLKSWD QFEIPKPFSE TSVQLHLIHL 
PAFENEAEIE SYTKQLAIQL HHA