| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0642 |
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| Symbol | |
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| ID | 6461647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 658936 |
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| End bp | 659619 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642726903 |
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| Product | hypothetical protein |
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| Protein accession | YP_002017558 |
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| Protein GI | 194335764 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000875739 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGATTA CTCCTTTTAC TGTAATGAGT TCCAAATATA ATGGTGTGAT GGTACAGGGA
GCTGTGGTGG GGGGAATGAC GAATTGGTCG GGGGGCGATC TCTTGCGGAC AGGTGAAAAA
AGGAGGGGCT TTCGTCATGA GACTGAAAAA AAGGATGGTC GAGTTCAGTG CGGGAGTGCA
CATTCTGGAG AAGACGGAGT GTATGCCATT ATGAAGCTTT TTGCATTTAT CATATTACTG
ACTTTGCTGC TTACTGGCGC CTGGCTTGTG GCTGCAAGTG CATCATCTCA GGCTGTGGTG
ATGGTTGGTC GTGACAGCTT TGGAGACGGA GGTGTTGCCA CTATTGCAAA GCCCGGTCAG
CAACCGGGTA ATCGTGTTAC GGTGCAGCAT GGTCTGATTG CTGCTGAAGA AGATCTCCCC
GGATTCTTCA GTTGGGCGGA AGCACGGGTG TCCTGTGATA GTTTGACTCT TCATGGTTAC
GATGATTGGT ATTTGCCTGA CAAGGATGAA CTGAACAGGC TGTTTTTCAG CAAGGGGGCT
GTTGGTGGCT TTTTGGATAC GTTGTACTGG AATTCGACAT CGAGTGATGC GCAAGAGGCC
TGGTCGCAGG ACTTTTTTGG CGGCACTCAG AATTCTGTCA AAAAGAGCGC CACTTTGCGT
GTTCGTCCTG TACGGAAGTT TTAG
|
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| Protein sequence | MMITPFTVMS SKYNGVMVQG AVVGGMTNWS GGDLLRTGEK RRGFRHETEK KDGRVQCGSA
HSGEDGVYAI MKLFAFIILL TLLLTGAWLV AASASSQAVV MVGRDSFGDG GVATIAKPGQ
QPGNRVTVQH GLIAAEEDLP GFFSWAEARV SCDSLTLHGY DDWYLPDKDE LNRLFFSKGA
VGGFLDTLYW NSTSSDAQEA WSQDFFGGTQ NSVKKSATLR VRPVRKF
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