| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0636 |
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| Symbol | |
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| ID | 6461671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 637472 |
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| End bp | 638461 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642726897 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_002017552 |
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| Protein GI | 194335758 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0903899 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAATC CATTTGCTGA TGATCTGATC GGTCAGGGAG AGGTTTTTAC CCAGTCTGTT
ATGGTGCCGA GGGCGATACT CTGGGTTCTT GTTCTTGCTT TTTTTGGCTT TATTGTATGG
GCCTCTGTTG CTGAAATAGA TGTTTCGATT CCTGCTACAG GAAAGCTTGA ACCGACAGGA
GAAGTTAAAA AAGTGCAGGC GGCGATTGAG GGTGAAGTGA GCGCTTTGCG GGTTGATGAT
GGCCAGCGGG TTAAAAAGGG GGAGGTGCTT CTTGAGTTAG TCCCGGTTTT GTCGGTTGGT
GAAGAGTCGA AGCTCAAGTC GTTGCAGATT AACCTCGACA ATACCCGCCA GCAGTATGCG
ACGGAGTCGG TGCTGCTCGG AAAGCTTCGC TCTCTGCTCA GTACGGCTGC CGTCTCTCAA
TTTGAGGTTG AACAGAAAAA ACTGGATGTA CTGAAACTGC AGGCTCAGGT TGCAGATCTC
ACTGAGCAGA TCAGCAAGCA GCAGTATATG ACGGGTCAGG CAACAGGTTA TGAATCCATA
ACGGCTCCGG TCAGTGGCAC CGTCTTTGAT CTTCAGGTGA AAAAGGGGGC TATTGTCAGT
TCCGGGCAGG TTATGCTCAA GGTTGTTCCT GATGACAATC TTACAACAAA GGCGTTTATT
TCAAACCAGG ATATCGGTTT TGTCTATGAA GGGTTGCCGG TTGATGTCAA GCTCGACGCC
TTTCCCTCTT CCGAGTTTGG CGATATCAAG GGGAGGGTGC TCCAGGTTGG TTCTGATGTG
CTTGCGCCTG ATGACATCAT CAAATATTAT CACTTTCCTG TCAAGGTAAC GCTTGAACGC
CAGTTTCTGG AGGTTAACGG GCGAAAAATT TTTCTGCAGT CTGGCATGTC GGTGACGATG
AACATCAAGG TGAGGAAGCG CACCGTTATG AGTATTTTTA CCGATCTTTT TACACAGCAG
GCCGATGCTA TAAGCCATAT CAGAAAGTAA
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| Protein sequence | MKNPFADDLI GQGEVFTQSV MVPRAILWVL VLAFFGFIVW ASVAEIDVSI PATGKLEPTG
EVKKVQAAIE GEVSALRVDD GQRVKKGEVL LELVPVLSVG EESKLKSLQI NLDNTRQQYA
TESVLLGKLR SLLSTAAVSQ FEVEQKKLDV LKLQAQVADL TEQISKQQYM TGQATGYESI
TAPVSGTVFD LQVKKGAIVS SGQVMLKVVP DDNLTTKAFI SNQDIGFVYE GLPVDVKLDA
FPSSEFGDIK GRVLQVGSDV LAPDDIIKYY HFPVKVTLER QFLEVNGRKI FLQSGMSVTM
NIKVRKRTVM SIFTDLFTQQ ADAISHIRK
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