| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0635 |
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| Symbol | |
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| ID | 6461674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 634425 |
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| End bp | 637475 |
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| Gene Length | 3051 bp |
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| Protein Length | 1016 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642726896 |
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| Product | cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter |
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| Protein accession | YP_002017551 |
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| Protein GI | 194335757 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR01846] type I secretion system ABC transporter, HlyB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000920365 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCATA CAATCGCAGA CAGTGACGCT GATATTTGCA AGGTTATAGG GGGGATTCCC
CTTTTCTCGG GTTTGGCAGA AGGTAAAATC AGGATGCTGG CCGGTGTTTG TTCCGTGGAG
CGCTATACCA TAGGAAAACC GGTAATCAGC GCCGGTATGC CTCCAGATTC GCTGTATGTT
ATTATCTCAG GACGTGTACG GTCACTCTAT AAGGAGGGCT CCAACGGAGT TGTTCAAACT
CTGAGGCTTC TCGGTGCCGG AGAGCTGTTC GGCTGGGTGG CTCTTATGCG TCGCCAGCCA
ACGGAGATTG TTACCGCTTC CGAGGAGACG CTCTGCCTGA AGATTCCCTT GTCGTCGTTG
AGCATGGTGA TCAATGAGCT GCCTCTCTTG TATGATCTGC TCTTTTCGAA AACGGATCCT
TCCGAGATTT GTGCTCTTCT TGAGACTCTG TTCAGCAAGG ATCCGAGGGT TGAGGCTCGT
ATTGGTGAGT CCGGCTTTTC AGGGATCAGG GATCTTTCCC TCCACCTTTA CCCTTCTGCG
GTTGTTGTTG ATACCGGTTT CAGCAGGGTG ATTCCCCAAA AAAAGCTTCA ATGGTTTGTC
AGCCGGAGCG ATGACCCGGC GTATCCTCCT GGCAGTGAGT ACCGACCCTC TTCCGGCGAA
TTGGCAGGCT CTTTTTCGTT GCGTCTGGTG GGGCTTGATT TGTCTTGTCT CAAGGAGTCT
GCTGTTGAGG TAAAGCCGAT TGTGGCTGAG CCTTTGCGCG GTGAACCGCT GGCGGGTATT
GCCAGTTCAG AGCGGCCGCA GGGAGAACCT GTCAGGGAGC AGCCCCGCGA AGAGTTCAGT
TGTCAAACGG AAGAGGAACA GGTAAGCGGC CGTTCAAAAG GATTCTATTT TTGTAAAGGG
AGGGGTGTTG TTGAGGAGAC AACAGCCTGT TTTCAGATGT TTGGCAAGCA TATGAATGTG
CCGGTTAAAA AAGATCTGAT ACAGAGCATT ATCGGAAACC AGTATGCGAG GAATGGTCAG
ATATCGCTGC AGGATTGTGG AGGTGTCGGG GTGGTGCTTG GCTTGAAAGC GCAGGTAGTG
AGTTTTTCCG AGGAGGCCAT GCTTCGGCTG AAGGTGCCTG CCCTTATTGG ATGGGAGAAG
AGTTTTGCTG TGCTTTACAA GGTTACAGCT AAAGAGGTTA CCCTCGCAGT CCCCTCTGCA
TCAGGTATTA AGGTACTTGC TGTAAAAGAG TTCTGGGAAA AGTGGGATCG CAGGGGGGAG
GCGCTGGTGC TTGATGCGAG AGAGGATACT CCTGAAAAAA AATTCGGGTT TGACTGGTTT
GCGCCCTCTA TCAAAAAGTA TCGCAATGTT CTTGGAGAGG TGATGATTGC CTCGTTTTTT
ACCCAGATCA TGACTCTGGT CAATCCGCTG TTGTTTATGG TCATCATCGA TCAGGTCATT
GTCAAGAACA GTTACAGCAC ACTGCATGTG CTTGGCACCT TTATGCTGAT CATTGCGATT
CTCCAGGCGG TGTTGAACAG TCTGAGAACC TATCTTTTTG TTGATACAAC GAATCGAATT
GATGTTGCAC TTGGTGCAGA GGTTATTGAT CATCTGCTGC GGCTGCCACT CCGTTTTTTT
GAAAAAAGGC CGGTTGGTGA GCTGAGTTCC CGGATCGGAG AGCTTGAGCA TATCCGTCAG
TTTTTAACGG GCACCGCTCT CGGGGTCGTT CTTGATGCAG TTTTTTCGTT CGTCTATGTT
GTTGTTCTCT TTGCTTTCAG TTGGAAGCTG GCGGTGATGG CTCTCTCGGT TGTTCCGGTA
ATTGGGTTGA TAACCTTTTT GTTGTCGCCG GTTATCCGGA AACAGTTGCG CGAAAAGGCG
GTAAAGCATA GTCTAACGAA TGCGTATTTG ATAGAGGTGC TATCGGGAAT TCAGACGGTC
AAGTCCCAGA ATATTGAGTT GCGTGCGCGC TGGAACTGGC AGGAAAAATA TGCGAGCTAT
GTCAAGGAGG GCTTCAAACC GGTTGTTTCG GGTACCATTG CCAATTCTGC CAACTCTTTT
CTCAGTCAGG CATCCGGGCT TATTGTAATA TGGGCCGGTG CGGCTCTGGT GTTGAATAAT
GAGCTGACCC TGGGCCAGCT TATTGCATTT CGTATTATTG CCGGTTATAT CACCAGTCCT
GTAATGAGGC TTGCTCAGCT CTGGCAGAAT TTTCAGGAAA CCGGCATGTC GCTTGAACGG
CTTGCTGATA TTGTTGATAC TCCGCAGGAG GGTGGCAAGG ATCAGTTGGC GCAGATTCCT
CTTCCTCTTG TCAAAGGTGA AATTTTCTGT GAAAATGTCT CGTTCCGTTT CAGGGATAAT
AGTCCGATGG TGCTGAAAAA TGTGACCGTT ACGATTCCTG AAGCTGCATT TGTTGGTATT
GTGGGGGAGA GCGGGTCGGG TAAAAGTACC TTCGCAAAAC TGATTCAGAG GCTCTACAGG
CTTGAAGAGG GCCGTATTTT TATTGATCAT TATGATATTG CCAAGGTTGA GCTCAATTCG
CTCCGAAGCC AGATCGGCAT TGTACCCCAG GATCCCATGC TTTTCAATGT TTCGGTAAAG
GAGAATATTG CTCTTACCAA TCCGGACGCA ACGGATGCCG ATATTATCCG TGCAGCCAGA
ATTGCCGAGG CTCATGACTT TATTATGGCT TTGCCTACCG GTTACAATAC GCCGGTTGGC
GAAAAGGGCT CCTCACTTTC GGGTGGTCAG CGCCAGAGAA TTGCCATTGC AAGAACCATT
TTACAAAACC CGGGTCTTAT CATTCTTGAT GAAGCTACAA GCGCTCTTGA TTCGGATACG
GAAAGCCGTT TGACGGCAAA TTTGATAACC GCTTTCAGAG GCAAAACAGT CTTGTTCATT
ACCCACAGGC TTAATTCGGT TAAAGCAGCA TCCCTGATTC TCTGTTTTCA TGATGGTTGT
ATTGATGAAG CTGGTACTCA TGATGATCTT ATGGGAAGAA AAGGGCGGTA TTACTCCTTG
TTCCAAAAAC AGTCTTTTTC AATTCCGGTT ATGGAGGGTA GCCTCGGATG A
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| Protein sequence | MSHTIADSDA DICKVIGGIP LFSGLAEGKI RMLAGVCSVE RYTIGKPVIS AGMPPDSLYV
IISGRVRSLY KEGSNGVVQT LRLLGAGELF GWVALMRRQP TEIVTASEET LCLKIPLSSL
SMVINELPLL YDLLFSKTDP SEICALLETL FSKDPRVEAR IGESGFSGIR DLSLHLYPSA
VVVDTGFSRV IPQKKLQWFV SRSDDPAYPP GSEYRPSSGE LAGSFSLRLV GLDLSCLKES
AVEVKPIVAE PLRGEPLAGI ASSERPQGEP VREQPREEFS CQTEEEQVSG RSKGFYFCKG
RGVVEETTAC FQMFGKHMNV PVKKDLIQSI IGNQYARNGQ ISLQDCGGVG VVLGLKAQVV
SFSEEAMLRL KVPALIGWEK SFAVLYKVTA KEVTLAVPSA SGIKVLAVKE FWEKWDRRGE
ALVLDAREDT PEKKFGFDWF APSIKKYRNV LGEVMIASFF TQIMTLVNPL LFMVIIDQVI
VKNSYSTLHV LGTFMLIIAI LQAVLNSLRT YLFVDTTNRI DVALGAEVID HLLRLPLRFF
EKRPVGELSS RIGELEHIRQ FLTGTALGVV LDAVFSFVYV VVLFAFSWKL AVMALSVVPV
IGLITFLLSP VIRKQLREKA VKHSLTNAYL IEVLSGIQTV KSQNIELRAR WNWQEKYASY
VKEGFKPVVS GTIANSANSF LSQASGLIVI WAGAALVLNN ELTLGQLIAF RIIAGYITSP
VMRLAQLWQN FQETGMSLER LADIVDTPQE GGKDQLAQIP LPLVKGEIFC ENVSFRFRDN
SPMVLKNVTV TIPEAAFVGI VGESGSGKST FAKLIQRLYR LEEGRIFIDH YDIAKVELNS
LRSQIGIVPQ DPMLFNVSVK ENIALTNPDA TDADIIRAAR IAEAHDFIMA LPTGYNTPVG
EKGSSLSGGQ RQRIAIARTI LQNPGLIILD EATSALDSDT ESRLTANLIT AFRGKTVLFI
THRLNSVKAA SLILCFHDGC IDEAGTHDDL MGRKGRYYSL FQKQSFSIPV MEGSLG
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