| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0629 |
|---|
| Symbol | |
|---|
| ID | 6461692 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | - |
|---|
| Start bp | 606154 |
|---|
| End bp | 608904 |
|---|
| Gene Length | 2751 bp |
|---|
| Protein Length | 916 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642726891 |
|---|
| Product | pyruvate phosphate dikinase |
|---|
| Protein accession | YP_002017546 |
|---|
| Protein GI | 194335752 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase |
|---|
| TIGRFAM ID | [TIGR01828] pyruvate, phosphate dikinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCACAAT CTGAGATTAC CAACGAAAAG GCCGGCAGTA AACAATACAT CTACAGTTTC
TCGGGCGGCT CTTCTGAAGG TGATGCGTCC ATGAAAAACC TGCTCGGCGG CAAAGGCGCC
AACCTTGCCG AGATGGCAAA CATCGGTCTG CCGGTTCCTC CCGGCTTCAC CATTTCAACC
GAAGTTTGCA CCTACTACTA CGAAAATCAA AAAAACTACC CCAAAAATCT ATTCGAGCAA
GGAATCCCCG ATGCGCTCCG CAAAATTGAA GAGACGCTCG GCAAAAAATT TGGAGACCCC
GAAAACCCCC TCCTGGTCTC CGTCCGTTCA GGTGCAAGAG CCTCAATGCC CGGCATGATG
GACACCATTC TCAACCTTGG TCTCAATGCA CAAACCGTTG ACGGCCTTGC AAAAAAATCA
GGAAACCCCC GCTTCGCATG GGACTGCTAC CGCCGTTTCG TGCAAATGTA CGGAGATGTC
GTGCTTGACC TCAAACCGAC CGACAAAAAA CAGATCGACC CCTTCGAAAA AATCCTTGAA
GCAAAAAAAC ACGAGCTCGG CATCGAGCTC GACACAGAAT TCACCGTTGA AGACCTCCAA
AGTATCGTCG CTGACTATAA AACCGCAATT CTTGAAAAAA CCGGCAAAAC CTTCCCTGAA
GACCCACACG AACAGCTCAT CGGAGCAATC GGAGCCGTCT TCAACAGTTG GAACAACGAG
CGGGCAATTG TATACCGCAA GCTCAACCAC ATTCCCGGTT ATTGGGGCAC CGCCTGCAAC
GTCCAGGCAA TGGTCTTCGG CAACATGGGC CTCGATTGCG GAACCGGCGT AGCCTTCACG
CGCGACGCCG CAACCGGCGA CAACATCTTC TATGGTGAGT TTCTGATGAA TGCCCAGGGA
GAGGATGTGG TAGCCGGAAC CAGAACCCCT CTGAAAATTG AACAACTCAA GGCCGAAAAT
CCAGGCATCT ACGACCAGCT CGAAGAGATT CGCTCCATTC TCGAACACCA CTACCACGAC
ATGATGGACA TCGAGTTCAC CATCGAGAAC AACATACTCT TCATGCTCCA GTGCAGGGTC
GGCAAACGCA CCGGCATGGC CGCAGTAAAA ATAGCCGTTG ACATGTTCAA CGAAAAACTG
ATTGACGAAA AAGAGGCACT GCTGCGCATC GAGCCCGAAC AACTCAACCA GTTGCTCCGG
CCCGTCTTCG ACATGAAAGA GAAGCAGGCA GCCATTCAGG AAGGACGACT CCTTGCAACA
GGACTGAATG CCGGCCCTGG CGCCGCTACC GGCAAAATCT ATTTCAACGC CGTCGATGCC
TACGAAGCCG GAAAACGCGG AGAAGCGGTC ATTCTTGTCC GCATCGAAAC CTCCCCCGAA
GACATCAAGG GCATGGATGC ATCAGAAGGT ATCCTCACCG AAAGAGGCGG CATGACCTCA
CACGCCGCAC TGGTAGCCCG TCAGATGGGC AAGGTCTGCG TCGCAGGATG CGGAGCGCTC
AGCATCGACT ACCAGAGAGG AGAACTGCGG GTACAAGGCA ACGATATTGT CCTGCATGAA
GGTGATTACA TCTCCATCGA CGGCAGCACC GGAGAGGTCA TTGCCGGAAA AGTAGCGACC
AAAAACTCCG AAATCATCGA AGTACTCGTC GACAAGAGCC TCAAACCCGA AGATGCCCCG
ACATGGCCGA TCTACCAGCA GCTCATGGAA TGGGCCGATA AATACCGCAA ACTCAACATC
CGCACCAACG CCGACCAGCC CGACCAGGCA GAAATCGCCA TCACCTTCGG CGCCGAAGGC
ATCGGCCTCT GCCGCACCGA ACACATGTTC TTCGGCGGAG AGCGCATTGA CGCCATGCGC
GAAATGATTC TGGCCGACGA TGTAGACGGC CGCAAAATAG CGCTTGAAAA ACTGCTGCCA
TACCAGCGCG ACGACTTCTA CGGACTCTTC AAGGCAATGG GTTCACGCCC GGTCACCATC
CGGCTTCTCG ACCCACCTCT CCACGAGTTC CTGCCACACA CCGACGACGA AATAAGGGCA
CTCTCCATCA AAATTGGCAG ATCCTTTGAA GAGATCAAAG AGCGTATCGG CGATCTGCAT
GAATTTAACC CCATGCTCGG CCTTCGGGGC TGCCGACTCG GCATCCTGCA CCCCGAAATC
ACCGTCATGC AGGTGCGGGC AATTATCGAA GCCGCATGCA AACTCAAAAA AGAGGGGCTC
GAAGTAGTAC CAGAAATCAT GGTGCCACTT GTCAGCACCG TCAAAGAGCT TGAAATCACC
AGCGAAGTGA TCCACAAAAC AGCACGCAGC GTCATAGCCG AACAAGGCAC AGGCGTCAAA
TACCTCGTCG GCACCATGAT CGAAGTACCC CGTGCAGCCA TCACCTCCGA CCAGATTGCC
ACCGCAGCCG ACTTCTTCAG CTACGGCACC AACGACCTCA CCCAGATGGG CCTCGGCATG
AGCCGTGACG ACTCAGGCCA ATTCCTGCCC ATCTACCAGC AACATGAAAT CTTCGCACGC
AACCCCTTCG AATCCATCGA CAAGGATGGC GTGGGCCGAC TCATGAGCAT CTCGGCAAAA
GAGGGACGGG CCGTCAAACC AGAACTCAAA CTCGGCATCT GCGGCGAACA CGGCGGCGAT
CCATCAACCG TCGAATTCTG CCACCAGTTG GGACTGAACT ACGTCTCATG CAGCCCCTAC
AGAGTACCGA TTGCCCGCCT TGCCGCTGCA AGAGCAGCAC TGAAAGGGTA A
|
|---|
| Protein sequence | MPQSEITNEK AGSKQYIYSF SGGSSEGDAS MKNLLGGKGA NLAEMANIGL PVPPGFTIST
EVCTYYYENQ KNYPKNLFEQ GIPDALRKIE ETLGKKFGDP ENPLLVSVRS GARASMPGMM
DTILNLGLNA QTVDGLAKKS GNPRFAWDCY RRFVQMYGDV VLDLKPTDKK QIDPFEKILE
AKKHELGIEL DTEFTVEDLQ SIVADYKTAI LEKTGKTFPE DPHEQLIGAI GAVFNSWNNE
RAIVYRKLNH IPGYWGTACN VQAMVFGNMG LDCGTGVAFT RDAATGDNIF YGEFLMNAQG
EDVVAGTRTP LKIEQLKAEN PGIYDQLEEI RSILEHHYHD MMDIEFTIEN NILFMLQCRV
GKRTGMAAVK IAVDMFNEKL IDEKEALLRI EPEQLNQLLR PVFDMKEKQA AIQEGRLLAT
GLNAGPGAAT GKIYFNAVDA YEAGKRGEAV ILVRIETSPE DIKGMDASEG ILTERGGMTS
HAALVARQMG KVCVAGCGAL SIDYQRGELR VQGNDIVLHE GDYISIDGST GEVIAGKVAT
KNSEIIEVLV DKSLKPEDAP TWPIYQQLME WADKYRKLNI RTNADQPDQA EIAITFGAEG
IGLCRTEHMF FGGERIDAMR EMILADDVDG RKIALEKLLP YQRDDFYGLF KAMGSRPVTI
RLLDPPLHEF LPHTDDEIRA LSIKIGRSFE EIKERIGDLH EFNPMLGLRG CRLGILHPEI
TVMQVRAIIE AACKLKKEGL EVVPEIMVPL VSTVKELEIT SEVIHKTARS VIAEQGTGVK
YLVGTMIEVP RAAITSDQIA TAADFFSYGT NDLTQMGLGM SRDDSGQFLP IYQQHEIFAR
NPFESIDKDG VGRLMSISAK EGRAVKPELK LGICGEHGGD PSTVEFCHQL GLNYVSCSPY
RVPIARLAAA RAALKG
|
|---|
| |