| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0608 |
|---|
| Symbol | |
|---|
| ID | 6461733 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | + |
|---|
| Start bp | 586649 |
|---|
| End bp | 587044 |
|---|
| Gene Length | 396 bp |
|---|
| Protein Length | 131 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 642726873 |
|---|
| Product | PilT protein domain protein |
|---|
| Protein accession | YP_002017528 |
|---|
| Protein GI | 194335734 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3744] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.332384 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCGTGC TTGATACGCA TATTTGGGTG AAATGGATTA TTGACGGTAA TCCAGCTCTG
TCAGAAAAAA TTGTCAATGC AATGAGGGTT GATTGTCATT GGACTGTTTC AGCTATATCC
TGCTTTGAGG TTTCTTTGTT GGTTAAACGT GGCAAGCTTC AGTTGCTCCT ACCCGTTGAA
GATTGGATAA AGGAAGTGCT TGAAAATTCA GGTATTGATT CACTTCCTGT TACCTGTGAT
ATTATGCATA AAGCCGCTAT GCTTTCCGAA ATTCACAGGG ATCCAGCAGA CCGGATAATT
ATCGCGGCTG CTCTTGTTTA TGATGCAAAA CTGGCAAGTA TAGATTCTGT ATTTCCGGAT
TACATGGAAC TGCAAGGCAG ATTGTTCGGT AAATGA
|
|---|
| Protein sequence | MIVLDTHIWV KWIIDGNPAL SEKIVNAMRV DCHWTVSAIS CFEVSLLVKR GKLQLLLPVE
DWIKEVLENS GIDSLPVTCD IMHKAAMLSE IHRDPADRII IAAALVYDAK LASIDSVFPD
YMELQGRLFG K
|
|---|
| |