Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0578 |
Symbol | |
ID | 6461805 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 563424 |
End bp | 564026 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642726852 |
Product | transferase hexapeptide repeat containing protein |
Protein accession | YP_002017507 |
Protein GI | 194335713 |
COG category | [R] General function prediction only |
COG ID | [COG0110] Acetyltransferase (isoleucine patch superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.566139 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGATA AGCAGCGCCA TACCGATAAC CCTTTTTACA AGGGTTTCTT CGAGAGCGAA GAACTCATGA ACATGGGCTT CATGTCTGTC GGGAAGAATG TGAAGATTGC AAAAAACTGT ACTATCGTCG GGCTTGAGAA TATTTCGCTG GGGAATAACA TCCAGATTGA TGAACAGGTG TTTATTGCGG TCAATAAAGG GTACCTCGAT ATCGGAGATC ACGTGCATAT CGGAGGTGGA TGCCATGTAA GTGGCACGGG TGGCGTAACG ATTTCGGATT TTTGCGGTTT GTCGCAGGGG GTGAGAATCT ATTCGGTTAC GGATGACTAT ACAGGGTATT CGTTAACGAA CGCAACAGTT CCCGAGCGCT TCAAAAGTGT TAAAGTCGCA CCGGTCAATC TGGGCAGGCA TGTGCTTATC GGATCGGGCA GCGTTGTTCT GCCGGGTGTT ACGATCGGAG AAGGTTCAGC GGTAGGAGCG CTTTCACTTG TCAGTATTTC GCTAGATGAG TGGGGGGTCT ATTTCGGCTC TCCGGCAAAG AGAATCAAGG CGAGGTCGAA GAAGTTGCTG GAGATGGAGA AGCTGCTTCG AGAAGGAGGT TGA
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Protein sequence | MSDKQRHTDN PFYKGFFESE ELMNMGFMSV GKNVKIAKNC TIVGLENISL GNNIQIDEQV FIAVNKGYLD IGDHVHIGGG CHVSGTGGVT ISDFCGLSQG VRIYSVTDDY TGYSLTNATV PERFKSVKVA PVNLGRHVLI GSGSVVLPGV TIGEGSAVGA LSLVSISLDE WGVYFGSPAK RIKARSKKLL EMEKLLREGG
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