Gene Ppha_0578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0578 
Symbol 
ID6461805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp563424 
End bp564026 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content49% 
IMG OID642726852 
Producttransferase hexapeptide repeat containing protein 
Protein accessionYP_002017507 
Protein GI194335713 
COG category[R] General function prediction only 
COG ID[COG0110] Acetyltransferase (isoleucine patch superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.566139 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGATA AGCAGCGCCA TACCGATAAC CCTTTTTACA AGGGTTTCTT CGAGAGCGAA 
GAACTCATGA ACATGGGCTT CATGTCTGTC GGGAAGAATG TGAAGATTGC AAAAAACTGT
ACTATCGTCG GGCTTGAGAA TATTTCGCTG GGGAATAACA TCCAGATTGA TGAACAGGTG
TTTATTGCGG TCAATAAAGG GTACCTCGAT ATCGGAGATC ACGTGCATAT CGGAGGTGGA
TGCCATGTAA GTGGCACGGG TGGCGTAACG ATTTCGGATT TTTGCGGTTT GTCGCAGGGG
GTGAGAATCT ATTCGGTTAC GGATGACTAT ACAGGGTATT CGTTAACGAA CGCAACAGTT
CCCGAGCGCT TCAAAAGTGT TAAAGTCGCA CCGGTCAATC TGGGCAGGCA TGTGCTTATC
GGATCGGGCA GCGTTGTTCT GCCGGGTGTT ACGATCGGAG AAGGTTCAGC GGTAGGAGCG
CTTTCACTTG TCAGTATTTC GCTAGATGAG TGGGGGGTCT ATTTCGGCTC TCCGGCAAAG
AGAATCAAGG CGAGGTCGAA GAAGTTGCTG GAGATGGAGA AGCTGCTTCG AGAAGGAGGT
TGA
 
Protein sequence
MSDKQRHTDN PFYKGFFESE ELMNMGFMSV GKNVKIAKNC TIVGLENISL GNNIQIDEQV 
FIAVNKGYLD IGDHVHIGGG CHVSGTGGVT ISDFCGLSQG VRIYSVTDDY TGYSLTNATV
PERFKSVKVA PVNLGRHVLI GSGSVVLPGV TIGEGSAVGA LSLVSISLDE WGVYFGSPAK
RIKARSKKLL EMEKLLREGG