| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0577 |
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| Symbol | |
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| ID | 6461806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 562681 |
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| End bp | 563406 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642726851 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_002017506 |
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| Protein GI | 194335712 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.52827 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGAAAG TTGTTGTTGT TACAGGCGCT ACGCGCGGTT TGGGGTTTGC CATTGCCCGG
CAATGCATAG CTGACGGGTA TAAGGTTGTT GCTGTCGGCC GCACCATGAC CGAGCCGTTG
GCTTCGTTGC TGCAGAGCTT TCCTGAGCGT ATTGTATTTG AACCATATGA TTTTTTTAAT
ACGGCGGGGA TTCATGCGTT TGCCGTCGGT ATCGTGAAAC GGCATGGTAG GCCCTGGGGG
CTTGTGAACA ATGCGGCTAT CGGTACCGAT GGAGTGCTTG CGACGCTGCA TGAACAGGAT
ATTGCCGATT TGATAACGAT CAACCTACAG GCGCCGGTTC TGCTGACCAA GTACCTGTTG
CGTCCCATGC TGCTGAACAG GGGGGGGCGG ATTATCAATG TTTCTTCGAT TATTGCCTCT
ACCGGTTTCA ATGGACTTTC CGTATATGGA GCGACGAAAG CTGCAATGGC GGGGTTGACG
AAGTCGCTGG CTCGTGAAGT AGGCAGAGCG AATATAACTG TCAATACCCT TGCGCCGGGG
TTTATGGAAA CCGATATGAC ATCGTCGCTT CAGGGAGAGA AGCTTGAGTC GGTCAGGCGC
CGTTCTCCAC TTGGGCATCT GGCTACCGTT GAAGATGCCG CTCATGCTGT GAGTTTTTTG
TTGAGCGAGA AAGCATCGAG TGTGACTGGA ACGACCTTGA CGGTGGATGC AGGCGCTACC
GCCTGA
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| Protein sequence | MMKVVVVTGA TRGLGFAIAR QCIADGYKVV AVGRTMTEPL ASLLQSFPER IVFEPYDFFN
TAGIHAFAVG IVKRHGRPWG LVNNAAIGTD GVLATLHEQD IADLITINLQ APVLLTKYLL
RPMLLNRGGR IINVSSIIAS TGFNGLSVYG ATKAAMAGLT KSLAREVGRA NITVNTLAPG
FMETDMTSSL QGEKLESVRR RSPLGHLATV EDAAHAVSFL LSEKASSVTG TTLTVDAGAT
A
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