| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0571 |
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| Symbol | |
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| ID | 6461818 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 556586 |
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| End bp | 557728 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642726845 |
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| Product | GDP-mannose 4,6-dehydratase |
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| Protein accession | YP_002017500 |
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| Protein GI | 194335706 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1089] GDP-D-mannose dehydratase |
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| TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00197933 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGTTG CTCTTATTAC CGGGATAACC GGCCAGGATG GATCTTATTT GGCGGAACTG
CTGCTTGAGA AGGGGTATGA GGTGCATGGC ATCAAGCGGC GGGCCAGCTC GTTCAATACC
CAGCGGATTG ATCATCTCTA TCGTGATCGC CATGATATTG AAAATGAGGG TTCTCCGGTT
TCTCATCACT CGTCGCTTTT TCTCCATTAT GGTGACCTGA CCGACAGCAG TAATCTGACT
CGCATTATTT CGGAGGTACA GCCTGATGAG GTCTATAATC TTGGTGCGCA GAGTCATGTT
GCGGTGAGTT TTGAGTCGCC GGAGTATACG GCTGATGTTG ATGCCATGGG TACGCTGCGT
CTGCTTGAGG CGATTCGCTT TCTGGGGCTT GAGAAGAAAA GCCGTTTTTA TCAGGCTTCG
ACGTCGGAGC TGTTTGGTTT GGTGCAGGAG ATTCCGCAGC GGGAGAGTAC CCCTTTTTAT
CCCCGCAGTC CCTATGCTGT GGCGAAACTT TATGCTTACT GGATTACGGT GAACTATCGT
GAGGCCTATG GGATGTATGC CTGCAACGGT ATCTTGTTCA ACCATGAGTC GTCGCGGCGG
GGTGAGACTT TTGTGACGCG CAAGATTACG CGGAGTCTTG CCAATATCAC CCAGGGGCTT
GAGGAGTGCC TCTATGTTGG TAACATGAAT GCCTTGCGCG ACTGGGGCCA TGCGAAGGAT
TATGTGCGGA TGCAGTGGAT GATGCTGCAG CAGGAGCAGC CGAAGGATTT TGTTATTGCG
ACGGGTGTGC AGTACAGTGT TCGCCAGTTT ATTGAAAAGT CGGCGGCGCA GCTTGGGATT
ACCATTCGCT GGGAAGGCAC CGGCATCAAC GAAGTCGGTA TTGTTGATTC ACTCAGTATT
CAGCACTCAG CACTCAGTAC TGGTTCAGTT ATTGTTCGGG TTGATCCGCG TTACTTCCGT
CCTGCGGAGG TGGAGACGCT GCTTGGGGAT CCGGCAAAGG CGAAAGCAGA TCTTGGCTGG
GTACCGGAAA TTACGCTTGA CGAGACGGTT GAGGAGATGG TAGCGTACGA TCTCGATCTC
GCCCGGCGTC ACGCCCTCCT CAAAGCCAAT GGTTATACCG TGGAGGTCAG CAAGGAGAGT
TGA
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| Protein sequence | MKVALITGIT GQDGSYLAEL LLEKGYEVHG IKRRASSFNT QRIDHLYRDR HDIENEGSPV
SHHSSLFLHY GDLTDSSNLT RIISEVQPDE VYNLGAQSHV AVSFESPEYT ADVDAMGTLR
LLEAIRFLGL EKKSRFYQAS TSELFGLVQE IPQRESTPFY PRSPYAVAKL YAYWITVNYR
EAYGMYACNG ILFNHESSRR GETFVTRKIT RSLANITQGL EECLYVGNMN ALRDWGHAKD
YVRMQWMMLQ QEQPKDFVIA TGVQYSVRQF IEKSAAQLGI TIRWEGTGIN EVGIVDSLSI
QHSALSTGSV IVRVDPRYFR PAEVETLLGD PAKAKADLGW VPEITLDETV EEMVAYDLDL
ARRHALLKAN GYTVEVSKES
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