| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0570 |
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| Symbol | |
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| ID | 6461820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 555599 |
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| End bp | 556579 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642726844 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_002017499 |
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| Protein GI | 194335705 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00285763 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATAAAA AAATATACAT AGCCGGTCAT CGGGGTATGG TTGGTTCTGC CATTGTGCGA
AACCTGCTTG CCGGGGGGCT CAGCTCGGAT AATCTGCTGT TCAGAACGCA TGCTGAGCTT
GATCTTACCT CTCAGGCGGC TGTTCGGGCA TTTTTTGAGG GTGAAAAGCC TGATCAGGTC
TATCTGGCGG CGGCGAAAGT TGGGGGGATT CATGCCAACA ACAGCTATCC GGCGGAGTTC
ATCTATCAGA ATCTGATGAT GGAGGCCAAT ATTATTCATG AGGCCTGGCG GGTGGGGGTT
CAAAAGCTCC TGTTTCTTGG CTCCAGTTGC ATCTATCCCA AGCTGGCGCC TCAGCCGATG
CCGGAAAGCG CTTTGCTGAC CGGGCCGCTG GAGCCGACCA ATGAACCCTA TGCCATTGCC
AAAATTGCGG GTATCAAGCT TTGTGAAAGT TATAACCGGC AGTATGGGGA GAGCGATGGC
ACTGATTTTC GCAGTGTCAT GCCGACGAAT CTGTATGGTC CCGGCGACAA CTATCACCCT
GAAAACAGCC ATGTTATTCC CGCGCTGATC CGTCGCTTCC ATGAAGCTAT GGTCAGCGGA
GATGCTGTTG TGACGCTCTG GGGTACCGGT ACGCCACTGA GGGAGTTTCT GTATGTTGAT
GACATGGCTG CAGCATGCAT TCACGTCATG AATCTCGACA AAGCGACCTT TGACGCCAAT
ACCACTCCTA TGCTGAGTCA TATCAATGTT GGCAGTGGCA AGGAGGTGAC GATTCGTGAA
CTTGCCGATA CTATTGCAAT GGTTATCGGT TTTCAGGGCG GTATTGCATT TGATGCCTCG
AAACCTGATG GCTCACCCCG GAAACTGATG GACAGCAGCC GACTCAACAA TCTTGGATGG
CAGCCGAAGG TGGGGCTTGA AGAGGGGCTG AGGCTGGCGT ATAATGATTT TCTTCTTCAT
GAACATGCTT CTCATTTTTA A
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| Protein sequence | MHKKIYIAGH RGMVGSAIVR NLLAGGLSSD NLLFRTHAEL DLTSQAAVRA FFEGEKPDQV
YLAAAKVGGI HANNSYPAEF IYQNLMMEAN IIHEAWRVGV QKLLFLGSSC IYPKLAPQPM
PESALLTGPL EPTNEPYAIA KIAGIKLCES YNRQYGESDG TDFRSVMPTN LYGPGDNYHP
ENSHVIPALI RRFHEAMVSG DAVVTLWGTG TPLREFLYVD DMAAACIHVM NLDKATFDAN
TTPMLSHINV GSGKEVTIRE LADTIAMVIG FQGGIAFDAS KPDGSPRKLM DSSRLNNLGW
QPKVGLEEGL RLAYNDFLLH EHASHF
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