Gene Ppha_0567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0567 
Symbol 
ID6461824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp553277 
End bp554035 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content40% 
IMG OID642726841 
Productglycosyl transferase family 2 
Protein accessionYP_002017496 
Protein GI194335702 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00524671 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAGCA TGTCTATTGT TACTGTTGTT AGAAATAATG AAACGACTAT TGCTGATTGT 
ATCTCTTCAG TGGCAGGCCA GAGTCTGCCG CCGTTTGAGC ATATTATTAT CGATGGAAAA
TCGACTGATG GAACATTATC AGAGATCAAG AAGCATCAAC ATTCCGCAGT CAAGTTAGTC
TCTGAGTCGG ATAAGGGTAT CTATGATGCT ATGAATAAAG GGATTCTACT TGCAACTGGT
GATATTATAG GGATCCTGAA CTCTGATGAT ATATATGCCC ATTCTCAGGT TCTTGAAAAC
GTGACGAAGT TATTTCAAGA AAGCTGTGCA GATGCCTTAT TTGCTGATTT GGTTTACGTA
AAATCTGATA ATGTAAATCA GGTAGTGCGT TATTACTCGG GAGCTGGATT TACTCCTGAA
AAGTTTGCCT GGGGTTGGAT GCCACCGCAT CCAACCTTTT TTGTTAGAAG GGAGATATAT
GAGCGTTATG GTCTGTTTGC TACCGATTAT CGTATTTCTG CTGATTATGA GCTGATGGCT
CGTTTTATGG CTCGTCACAG GGTAAATTAT CTCTATATGT CTGACGTCAT TGTTCGGATG
CGAACAGGTG GCGTCAGTAC GCGAAACTTG AAAAGTAACT GGATTTTGAA TCGTGAAATT
CTACGGGCTT GCACCGATAA TGGCATTGAT ACGAATATCT TTAAAGTCTA TTCGAAATAT
TTTCGCAAAG TGTCGCAGCT TTTTGCAAGG CCAGCATGA
 
Protein sequence
MLSMSIVTVV RNNETTIADC ISSVAGQSLP PFEHIIIDGK STDGTLSEIK KHQHSAVKLV 
SESDKGIYDA MNKGILLATG DIIGILNSDD IYAHSQVLEN VTKLFQESCA DALFADLVYV
KSDNVNQVVR YYSGAGFTPE KFAWGWMPPH PTFFVRREIY ERYGLFATDY RISADYELMA
RFMARHRVNY LYMSDVIVRM RTGGVSTRNL KSNWILNREI LRACTDNGID TNIFKVYSKY
FRKVSQLFAR PA