Gene Ppha_0566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0566 
Symbol 
ID6461826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp552359 
End bp553261 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content42% 
IMG OID642726840 
Productglycosyl transferase family 2 
Protein accessionYP_002017495 
Protein GI194335701 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00277613 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATCA CTGCCATTAT TTTGACTTTT AACGAAGAGC GACATCTTGC ACGCTGCATT 
GCCAGTTTGA AAGGTATTGT AAGTGAAATA ATTGTTGCGG ATTGTTTTTC AACTGATGCA
ACACTGGATA TTGCATGTGC AAATGGGGCA AGAGTAATTC AGCATGAATG GGTTAGCCAT
GCAGCTCAAT TTAACTGGGC ACTTACCCAA CTTGCTGCTG ATACTGACTG GGTTTTGCGT
GTTGATGCTG ATGAATATTT GACTCCTAAT CTTATTGCTG AAATTAAGTC CACTCTACCG
GGTATTGGAA CGAAGATCGA TGGAGTGTAT TGTAGTCGTC GTATGACATT TCAGGGCAGA
TTGATTCGTC ATGGTGGCGT TTTTCCAGCA CGTGTTTTGC GTCTGTTTCG TTATGGACGT
GGTCAGTGTG AAAATCGTTG GATGGATGAA CACATCAAAG TTGCTGGTCC GACCGTTGAT
TTTAATGGCG AAATGATTGA TGATAGCCTT AATTCGCTTA CTTGGTGGAC AGAGAAGCAC
AATAAATATG CAAGCAGGGA AGCCGTCGAT TTATTGAACC TGGAATATGG TTTTATGCCT
CATGATTCTG TTGCCAGTTT GCGTAATGGC AAACAGACTG GAGTGAAGCG CTGGCTGAAG
GAAGAGGTAT ATGCGCGACT TCCTGGAGGA TTTCGTGCAT TTACCTATTT TTTTTATCGG
TATGTAATCC GGATGGGTTT TCTTGATGGT CAGGCAGGTA CAGCCTTTCA TTTTCTTCAA
GGATTCTGGT ACCGATATTT GGTAGACGCT AAAGTGTTTG AGGTGAAACG GTATATGCGG
GATACAAATG CAAATATTGT GATGGCGATT GATAAAGTGT TGGGTGTTAA ATTGGAAAGC
TGA
 
Protein sequence
MKITAIILTF NEERHLARCI ASLKGIVSEI IVADCFSTDA TLDIACANGA RVIQHEWVSH 
AAQFNWALTQ LAADTDWVLR VDADEYLTPN LIAEIKSTLP GIGTKIDGVY CSRRMTFQGR
LIRHGGVFPA RVLRLFRYGR GQCENRWMDE HIKVAGPTVD FNGEMIDDSL NSLTWWTEKH
NKYASREAVD LLNLEYGFMP HDSVASLRNG KQTGVKRWLK EEVYARLPGG FRAFTYFFYR
YVIRMGFLDG QAGTAFHFLQ GFWYRYLVDA KVFEVKRYMR DTNANIVMAI DKVLGVKLES