Gene Ppha_0556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0556 
Symbol 
ID6461851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp542618 
End bp543958 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content37% 
IMG OID642726831 
Producthypothetical protein 
Protein accessionYP_002017486 
Protein GI194335692 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAAGTT CTGAATACCC GAGGGTTTTG CTGGTACTGA TGGCTAAGAT TAAGATAGAG 
GAGCCTATAA ATCTCATTAT TAGAAAACAG TTTGGACAAT GGCCATCGGA TCATCTTGCA
CAGATATATT CTGGTGAATC AAAGGGATCA GGAGAGTTTT GTGATTATTA TTATCATTTG
CAGGCTAATG ACCGTGTTTT TGGTAGTATC TATAATAAAA TACGCAGAGG CATTGTTGAT
ATAGTTGCGA TTCACTCAGA AAATAATCAT TCGAACATTA AAAGAACATA CTCGTTTAAG
AGTTTTATTG CCGTTATCAA GAAGCATTTT GGTGAGTGGC TAATAGCTTC AGGGTTATGG
GAAATGATTT TTCGTGTACG TTTATCATCT TCTATGGCGA CGTTTGTTAG CGAATTTAAG
CCGGACTTGA TCTATTGTCA GGGCTATTCG TTGGGATTTG TAACTCTGCC AATGCTGATT
GCCAAACGAT TTAGTATTCC AATTTGCTTT CAGACCACAG ATGACTGGCC AAGTTATACT
TACAATTCTT TTCCTATGGG CAGTATTCTA CGCCACCGAA CACGGCAATT AGTATCAAGA
GCTACTCTTC GTATGGCTTT TGGTGAAAAA ATGCAGCGGT TGTATAAGCG TAGGTATGGT
GAAAGCTTTG ACGTAACATA CCATTTAGAT GATCCTATGC GATTTCTGAT GAGTTCTGGC
TCTAAAATTG AACAAGAGAT CATTATTAAA CAGCATAGGA TTGTTTATAC CGGTAGTCTT
GCATTACGCC GTTATGAAGC TCTTCAAGAC TTACTTGCTG CAGTCAAAAT AATGAAAAAT
AATAGTATAG AGATTCAAAT TGATGTTTAT TGTTCAGGAA TACCAAAAGA TCTACCAATA
GAACTTCTTG ACGCTTCTGA GATTGTGTTT TATCCTTTGC CATCCCATGA AGAAATTCCG
AAAGTGCTGT CTACGGCATC GGTATTATTT CTTCCGGAAT CTTTTAATGT GGCTCAAAAA
ATGATAGAAT ATTCCATATC CAGCAAGGCC CATCTTTACA TGATGAGTGG TCAGCCTATA
TTGGTTTATG GACCGGAATA TAGTGGAACT GTTGAGTATG CTGTACGTAT GGGTTGGGGT
GTCGTTGTTT CGAAACGTAG TGTTTTACTA CTCAAAGCTG CATTGAGGGA GTTGCTTGAT
AGTGAACAGA GAAAATGTCA GATCCGTTTG AATGCTCAAG AGTGTATACA GCGTTATCAT
AATATGAAAG ATGGACAAGA TAAATTTCTT AAGATGCTTA AAAGTATAGA ACATATCGAA
GAAAAATCTA TTGTGAAATG A
 
Protein sequence
MVSSEYPRVL LVLMAKIKIE EPINLIIRKQ FGQWPSDHLA QIYSGESKGS GEFCDYYYHL 
QANDRVFGSI YNKIRRGIVD IVAIHSENNH SNIKRTYSFK SFIAVIKKHF GEWLIASGLW
EMIFRVRLSS SMATFVSEFK PDLIYCQGYS LGFVTLPMLI AKRFSIPICF QTTDDWPSYT
YNSFPMGSIL RHRTRQLVSR ATLRMAFGEK MQRLYKRRYG ESFDVTYHLD DPMRFLMSSG
SKIEQEIIIK QHRIVYTGSL ALRRYEALQD LLAAVKIMKN NSIEIQIDVY CSGIPKDLPI
ELLDASEIVF YPLPSHEEIP KVLSTASVLF LPESFNVAQK MIEYSISSKA HLYMMSGQPI
LVYGPEYSGT VEYAVRMGWG VVVSKRSVLL LKAALRELLD SEQRKCQIRL NAQECIQRYH
NMKDGQDKFL KMLKSIEHIE EKSIVK