| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0534 |
|---|
| Symbol | |
|---|
| ID | 6461933 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | + |
|---|
| Start bp | 523695 |
|---|
| End bp | 524399 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 642726820 |
|---|
| Product | acylneuraminate cytidylyltransferase |
|---|
| Protein accession | YP_002017475 |
|---|
| Protein GI | 194335681 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1083] CMP-N-acetylneuraminic acid synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCAA TCGCATTTAT CTTCGCCCGT GGTGGTTCCA AAGGTTTGCC CGGCAAAAAT
ATCCGTCCCT TAGGTGGAAA ACCATTAATT GCGTGGTCCA TTGAGCATGC ACTTACTGTC
AATCGGATTA AAAGGGTTCT TGTTTCCACT GATTCTGAAG AAATTGCAGC AGTAGCGCGT
GAGTATGGCG CCGAAGTACC CTTTATTCGG CCAGCAGAAC TGGCGCATGA CAATAGCCCT
GAGTGGCTCG CTTGGCGTCA TGCCCTTAAT TATTTGCTTG AAACAACAGG TGTATTGCCT
GAAATAATGG TCACTGTACC AACCACAGCG CCCTTGCGGA TGGTGCTGGA CATCGAAAAC
TGCCTTAATG AATACGAAAA AGGCGATGCT GATATGGTCA TCACCGTTAC CGAAGCCCAC
CGAAGCCCAT ACTTCAATAT GGTAAAAACT AACACAGATG GTACCGTTGG GCTGGTTAAC
CCGCCGCAAT CAGCCATTGC CCATCGACAG GAAGCACCAG TGGTTTACGA CATGGCTACA
GTCTGCTATG TAGCGAGCCC TAAATTTATA ATGACTCATA ATGCTATGTT TGACGGCAGG
GTCAAGGCGG TACAGGTGCC CGCAGAACGT GCGATCGATA TTGATACTTT GCTTGACTTT
CAGATTGCCG AATGCCTTTT AAAAATAAGA GAACAGAAAC AGTGA
|
|---|
| Protein sequence | MKAIAFIFAR GGSKGLPGKN IRPLGGKPLI AWSIEHALTV NRIKRVLVST DSEEIAAVAR
EYGAEVPFIR PAELAHDNSP EWLAWRHALN YLLETTGVLP EIMVTVPTTA PLRMVLDIEN
CLNEYEKGDA DMVITVTEAH RSPYFNMVKT NTDGTVGLVN PPQSAIAHRQ EAPVVYDMAT
VCYVASPKFI MTHNAMFDGR VKAVQVPAER AIDIDTLLDF QIAECLLKIR EQKQ
|
|---|
| |