| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0530 |
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| Symbol | |
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| ID | 6461954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 519935 |
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| End bp | 521257 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 642726816 |
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| Product | LPS biosynthesis protein, PseA-like protein |
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| Protein accession | YP_002017471 |
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| Protein GI | 194335677 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03573] N-acetyl sugar amidotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0107951 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATAAAA TAAAATATCC TCAACCTATT GATTTAGCTC CATTCAATAA AAAAAATGCT
AAACCAGATG CGTTTTATGG ACTACCTCAA GAGGTTATTT ATTGCAAAAA GTGTGTAATA
TCAAACCAAA GACCAAATTC AGCGGTAGAG TATAAGCATA CTAGAGAAAC CAAAAAAGCG
ACAATCAACT TCGATGAAAA TGGTGTTTGT GATGCCTGTA ACTTTACAGA GCGCAAGCGT
CATAGTATTG ATTGGATTGA TCGTGAAAAA CAGTTGCGTG AGCTTTGTGA TGTGCACCGT
AAAAGTGATG GTTCCTACGA TTGTATTACT CCTGGTTCAG GAGGAAAGGA CAGTTTTTAT
GCGTCTCATA TTTTAAAAAC AAAGTATGGA ATGCATCCGC TCACAGTAAC ATGGGCTCCT
CATGTTTATA CCGATTGGGG CTGGAAAAAT TTCCAATCAT GGATCCATGC AGGGCACGAT
AATTATTTGA TGACACCAAA TGGTCGAGTG CATCGTATCT TGACAAGACT TTCGACGGAA
TTGCTTTTTC ATCCATTTCA GGCATTCATG TTCGGCCAGA AATCATTAGC CCCAAAAATG
GCGTTATTAT TTAATATTCC ATTGGTGTTT TATGGCGAAA ATGAGGCGGA ATATGGGAAC
CCGATTGGTG ATACCGATAC AGCTAAAAGG GATTGGTCAT ACTTTACCTC TGCGGATCAA
TCTAGGATTT ATCTTGGAGG TGTTTCTGTA GCGGATCTGA AGTCTCAGTT TGGAGTTGAT
CAAAATGATT TACAACCCTA TTTACCTGCC GATCCTAACA GAATTGCTGA ACAAAAAATA
GAAGTCCATT ACTTAGGTTA TTACTTGAAA TGGCACCCAC AGGCATGTTA TTATTATGCA
GTCGAACATG GTGGTTTTCA AGCGTCACCA GAACGGACAC CTGGTACCTA TTCAAAGTAT
AACAGCATAG ATGATCGTAT TGATGATCTT CACTACTATA CCACGGGAAC CAAGTTTGGG
ATTGGTCGTG CTAGTTACGA TGCTGCTCAA GAAATTCGTT CTGGAGATAT CAATCGAGAA
GAAGGTGTCG CATTAGTCAA GCGTTTTGAC CATGAGTTCC CTGAACGGTT TGCGGATGAA
CTCTTTAAGT ATTTATGTTT GCCTGAAAAA GAATTTCCTG TAGCAAGCCA AATGTTTGAA
CAAAATATGA TGGATCGTGA GTACTTTCGC TTGCTTACAG ATCATTTTCG TTCGCCTCAT
TTGTGGGTCA ACGAAAATGG AAAGTGGAAG TTAAGAAATG CAGACTTGCT TGATAATCAA
TAA
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| Protein sequence | MDKIKYPQPI DLAPFNKKNA KPDAFYGLPQ EVIYCKKCVI SNQRPNSAVE YKHTRETKKA
TINFDENGVC DACNFTERKR HSIDWIDREK QLRELCDVHR KSDGSYDCIT PGSGGKDSFY
ASHILKTKYG MHPLTVTWAP HVYTDWGWKN FQSWIHAGHD NYLMTPNGRV HRILTRLSTE
LLFHPFQAFM FGQKSLAPKM ALLFNIPLVF YGENEAEYGN PIGDTDTAKR DWSYFTSADQ
SRIYLGGVSV ADLKSQFGVD QNDLQPYLPA DPNRIAEQKI EVHYLGYYLK WHPQACYYYA
VEHGGFQASP ERTPGTYSKY NSIDDRIDDL HYYTTGTKFG IGRASYDAAQ EIRSGDINRE
EGVALVKRFD HEFPERFADE LFKYLCLPEK EFPVASQMFE QNMMDREYFR LLTDHFRSPH
LWVNENGKWK LRNADLLDNQ
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