| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0524 |
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| Symbol | |
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| ID | 6461973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 513879 |
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| End bp | 514877 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642726810 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_002017465 |
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| Protein GI | 194335671 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAATCAG TTCTCATCAC CGGTGCAGAT GGCTTTATTG GATCACATCT GACCGAAGCT
CTTGTTCGTC AAGGCTACAA TGTCCGGGCT TTCGTTTTCT ACAACTCCTT CAACTCATGG
GGTTGGCTTG ATCAATGCGC TACAGATATA AAAGGGAAAT TTGAGGTGTT TGCTGGCGAT
ATTCGTGATC CGCATGGGGT GAAGGAGGCC ATGAAAGGTT GCGATGTTGT ACTGCATCTG
GCAGCACTCA TAGCTATACC CTACTCTTAC CACTCACCCT ACACCTATGT TGATACCAAC
ATCAAGGGAA CTCTCAATGT CTTGCAGGCT GCTCGGGAAC TTGGTGTTAA GAAAATCGTA
CATACTTCCA CGAGCGAAGT TTATGGTACT GCGCGTTTTG TGCCGATTAC AGAAGAACAT
CCATTGCAAG GCCAGTCTCC TTACTCAGCT ACCAAAATAG CAGCCGATCA GTTGGCTTAT
TCCTTTTTTG CCTCTTTTGG GTTGCCAGTG ATTATTGCGA GACCGTTCAA TACGTATGGT
CCACGTCAGT CAGCGCGTGC AGTGATTCCT ACTATCATTA CTCAGATTGC AAATGGTAAT
CGTCAGATAA AACTTGGCGC AGTAAGGCCT ACGCGCGATT TTAATTATGT GCAGGATACG
GTTGCCGGAT TTATTGCGGC GATGAAATCT AATCAAGGAT TGGGTGAGGT CGTCAATTTT
GGAAGTAACT TTGAGATATC CATTGGTGAT ACAGTACAGT TAATTGCAGA AGTGATGAAT
ACCAAGATTG AAATTATTAC GGATGAAGAT CGTTTGCGTC CAGCGAATTC TGAGGTTGAG
CGTTTATGGG CTGATAACTC AAAAGCCAGT CAACTTTTTG GTTGGGAGCC AAGCTATGGT
GGGCGCGAGG GGTTCAAGCG CGGTCTTGCT GAAACCGCGG AGTGGTTCTT GAACCCTACG
AACCTTGCCA GTTACAAGTC AGATATATAC AACCTGTGA
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| Protein sequence | MQSVLITGAD GFIGSHLTEA LVRQGYNVRA FVFYNSFNSW GWLDQCATDI KGKFEVFAGD
IRDPHGVKEA MKGCDVVLHL AALIAIPYSY HSPYTYVDTN IKGTLNVLQA ARELGVKKIV
HTSTSEVYGT ARFVPITEEH PLQGQSPYSA TKIAADQLAY SFFASFGLPV IIARPFNTYG
PRQSARAVIP TIITQIANGN RQIKLGAVRP TRDFNYVQDT VAGFIAAMKS NQGLGEVVNF
GSNFEISIGD TVQLIAEVMN TKIEIITDED RLRPANSEVE RLWADNSKAS QLFGWEPSYG
GREGFKRGLA ETAEWFLNPT NLASYKSDIY NL
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