Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0513 |
Symbol | |
ID | 6462005 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 501080 |
End bp | 502909 |
Gene Length | 1830 bp |
Protein Length | 609 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642726800 |
Product | Radical SAM domain protein |
Protein accession | YP_002017455 |
Protein GI | 194335661 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATATT TCAATCACCT CTGTTTCGTT GAGGCACCCC AAACCGTCAT CGCACCTTTT CCCCGCTTCA TAACCGATTG CATAGGCATC TGCTACCTCG CCGCAGCCGT GGAGCATGAC GTCGAAAGTC TCGTCATGCC CGACAACTAC TACAACGACG GGATTTTCGA GAGCCTCCGC ACGCTGCTGA AAAAACAGCC GGTTGACCTT GTCGCCATCT CCTCCATGAC CGGCGCCTTC AACCAGGCCG CACGACTTGC CAAAATAGCC AAAGAGGCTG GCGCCTTTGT TGTCATGGGC GGCTTTCACC CCACAGCGCT TCCCGAAGAG GTGCTGAAAC TCTCCTGCGT GGATGTTGTC GTAATCGGAG AGGGTGAAGA GAGCTTCCGC GAACTCGTTC TCAAAGGCCC CTCCCGCGAC ATCAGGGGAA TCGCCTACAG GGGCGGCGGC GGCATTATCT ATACCGAACC GAGAACGACC ATTGCCGATG TCGACTCCAT TCGCTTTCCG CTGCGCACCC TTCGTCCGAA CCGTTATGGC GAAAAGGGCG ACGCCTACTC TATCGACACC ATCTACACCT CCAGAGGCTG CCCCTGGAGC TGCTCCTTCT GCGCCAACGA CCAGATGCAC AAAGGATGGA GAGGGCGGAG CGCCGAAAAT GTTGTTGAAG AGATTGCCCT GCTCCACGAC CCCAAAAACA AAAAGCTGCT CAAAATCTGG GACGCCAACT TTCTCACCAA CATCAAGCGG GCAGAAAGAA TTTGCGACCT CATGATCGAG AGGGGATTGA CCAACTTCAG GATTGTGACC GAAACCAGGG CAAAAGATCT TGTCCGTGCC GAACGAATAC TCGGTAAACT CCGCCGCGTC GGACTCAGCA AGGTGGGCCT CGGCATCGAA AGTCCCAACG AGGCCACCCT TGCCCTCATG AACAAAAAGA ACAGCCTCAA CGACGTTGCC CGCGCCATCG CACTCTGCCG CGAGCACAGC ATAGGAGCCG AGGGCTACTT CATCATCGGC CACTACACCG AAAACATGAA AGAGACCATG GTCTACCCCG AGTTTGCCCG TTCACTCGGC CTTCGCCAGG CGCTCTTCAT GGTGATGACC CCCTACCCCG GCACCGCTAT TTTCAACGAA TACAAAAGCG AAGGAAAAAT CCGCTCATAC GACTGGGATC TCTACAACAA CTACTGCCCG GTTATTGAGA CCCGAACCAT GAACGGCGAC ACCCTTGTTG CCATGCTGGC CTATTGCAAC ATCTCCTTCA ACCGTTTCCG CTCCATCATG AAACGCAACA GCAAAAATGC CTTGCTGCTC AACTTCATGA TCGACCTCTT CCAGCTCTGC TTTCTCCTGC GGGTCAACAA AAACATCTCA ACCCCGCAGA TTGCCGACCT GCTCTTCAAC GCCCTGCAAC TCCTGCTCGA CAACGAAGGT GGAGAGATTG AGCAGCCTGC CGCCTCATCA TGCAAACGGC TGCCGAAGCC CATGACACTC CGCATCCGCC ACTCATCCGG GAAAAGCATC ACCTACAGCC TGCACGAACG GGGCGCCAAC CGGGTAATGA GCATGACCGC CCAGCAGGAG GGCAGAGAGG CCACCTCAAC TCCCGATCTG GAGATCAGTC TCGACCGATT GGTTGAATCG GCCTGCTCCC TCTCCATGGA CACCCTCATG AGCGCCCTCT ACCGGAACGA ATGGCTGCGG AACAACCCCG GCAGAATGAC CGGCCAGATC ATCGCCATCC TTGCCGACCC TGAAATCCTC CGCTTTGGCG GAAAACTGGC CACGCTCTAC CTTCGCGCCT ACCTCAAGAG CGCCCGATAA
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Protein sequence | MAYFNHLCFV EAPQTVIAPF PRFITDCIGI CYLAAAVEHD VESLVMPDNY YNDGIFESLR TLLKKQPVDL VAISSMTGAF NQAARLAKIA KEAGAFVVMG GFHPTALPEE VLKLSCVDVV VIGEGEESFR ELVLKGPSRD IRGIAYRGGG GIIYTEPRTT IADVDSIRFP LRTLRPNRYG EKGDAYSIDT IYTSRGCPWS CSFCANDQMH KGWRGRSAEN VVEEIALLHD PKNKKLLKIW DANFLTNIKR AERICDLMIE RGLTNFRIVT ETRAKDLVRA ERILGKLRRV GLSKVGLGIE SPNEATLALM NKKNSLNDVA RAIALCREHS IGAEGYFIIG HYTENMKETM VYPEFARSLG LRQALFMVMT PYPGTAIFNE YKSEGKIRSY DWDLYNNYCP VIETRTMNGD TLVAMLAYCN ISFNRFRSIM KRNSKNALLL NFMIDLFQLC FLLRVNKNIS TPQIADLLFN ALQLLLDNEG GEIEQPAASS CKRLPKPMTL RIRHSSGKSI TYSLHERGAN RVMSMTAQQE GREATSTPDL EISLDRLVES ACSLSMDTLM SALYRNEWLR NNPGRMTGQI IAILADPEIL RFGGKLATLY LRAYLKSAR
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