Gene Ppha_0504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0504 
Symbol 
ID6462023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp495148 
End bp495786 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content52% 
IMG OID642726792 
Productendonuclease III 
Protein accessionYP_002017447 
Protein GI194335653 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAAA CCCCTGAAGA AAAAATCGTT TTCCTCAATG AGCTGCTTGG GGCGGCATAC 
CCGAACCCGA AAAGCGAACT GAACTACGAG AGCCCTTTTC AGTTGCTCAT AGCGACCATC
ATGGCGGCCC AGGCTACCGA CAGGCAGGTC AATGTTATTA CGAGGGAGCT CTTCAGGTGT
GCACCGGATG CCGAAACCAT GAGCCGGATG GAGCTTGATG AGGTCAGAAG CCTTGTGCGC
TCCATAAATT ATTGCAACAA CAAGGCTAAA AATATCCTTG CGGTAAGCAG GATTTTGGTT
GAGCGCTGGC AGGGCGTGGT ACCAGGTACG AGGGAGGGAC TCGAAAGCCT GCCCGGTGTT
GGCAGAAAAA CAGCGAACGT TGTGCTGAGC AACGCTTTTG ACCAGCCGGT CATGCCGGTC
GATACACATG TGCACCGGGT TTCGAACCGG ATCGGACTGG TTCATACCGA AAAGCCGGAA
GAGACCGAAG CCGGGCTGAT GACGATTATT CCCGAAGCAT GGGTTATCCC CTTTCATCAC
TATCTGCTGC TGCATGGTCG TTACACCTGC AAGGCAAAAA AGCCAGACTG TGCACATTGT
ACCGTTTCGG GCATCTGCGA CTATCCGGCA AAAAACTAA
 
Protein sequence
MKQTPEEKIV FLNELLGAAY PNPKSELNYE SPFQLLIATI MAAQATDRQV NVITRELFRC 
APDAETMSRM ELDEVRSLVR SINYCNNKAK NILAVSRILV ERWQGVVPGT REGLESLPGV
GRKTANVVLS NAFDQPVMPV DTHVHRVSNR IGLVHTEKPE ETEAGLMTII PEAWVIPFHH
YLLLHGRYTC KAKKPDCAHC TVSGICDYPA KN