Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0504 |
Symbol | |
ID | 6462023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 495148 |
End bp | 495786 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642726792 |
Product | endonuclease III |
Protein accession | YP_002017447 |
Protein GI | 194335653 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0177] Predicted EndoIII-related endonuclease |
TIGRFAM ID | [TIGR01083] endonuclease III |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACAAA CCCCTGAAGA AAAAATCGTT TTCCTCAATG AGCTGCTTGG GGCGGCATAC CCGAACCCGA AAAGCGAACT GAACTACGAG AGCCCTTTTC AGTTGCTCAT AGCGACCATC ATGGCGGCCC AGGCTACCGA CAGGCAGGTC AATGTTATTA CGAGGGAGCT CTTCAGGTGT GCACCGGATG CCGAAACCAT GAGCCGGATG GAGCTTGATG AGGTCAGAAG CCTTGTGCGC TCCATAAATT ATTGCAACAA CAAGGCTAAA AATATCCTTG CGGTAAGCAG GATTTTGGTT GAGCGCTGGC AGGGCGTGGT ACCAGGTACG AGGGAGGGAC TCGAAAGCCT GCCCGGTGTT GGCAGAAAAA CAGCGAACGT TGTGCTGAGC AACGCTTTTG ACCAGCCGGT CATGCCGGTC GATACACATG TGCACCGGGT TTCGAACCGG ATCGGACTGG TTCATACCGA AAAGCCGGAA GAGACCGAAG CCGGGCTGAT GACGATTATT CCCGAAGCAT GGGTTATCCC CTTTCATCAC TATCTGCTGC TGCATGGTCG TTACACCTGC AAGGCAAAAA AGCCAGACTG TGCACATTGT ACCGTTTCGG GCATCTGCGA CTATCCGGCA AAAAACTAA
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Protein sequence | MKQTPEEKIV FLNELLGAAY PNPKSELNYE SPFQLLIATI MAAQATDRQV NVITRELFRC APDAETMSRM ELDEVRSLVR SINYCNNKAK NILAVSRILV ERWQGVVPGT REGLESLPGV GRKTANVVLS NAFDQPVMPV DTHVHRVSNR IGLVHTEKPE ETEAGLMTII PEAWVIPFHH YLLLHGRYTC KAKKPDCAHC TVSGICDYPA KN
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