| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0496 |
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| Symbol | |
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| ID | 6462043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 485470 |
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| End bp | 486240 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642726784 |
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| Product | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase |
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| Protein accession | YP_002017439 |
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| Protein GI | 194335645 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
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| TIGRFAM ID | [TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.349953 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGATTA TTCCAGCCAT AGACATCAAA GAGGGGAAGT GTGTACGACT GACCCGTGGC
GACTTCAGCC AGAAAAAAAT ATACCTCGAC AACCCCAACG ACATGGCCAT CATCTGGCGC
AAGCAGAACG CCAAAATGCT CCATATCGTT GACCTCGATG CCGCCCTTAC CGGCGAAATG
GTCAATTTTG AAAAAATCAG GGAGATCGTC ACCAATCTCG ACATTCCCGT CCAGGTCGGC
GGTGGTATCC GCTCCGCCGA TGCAGTCAAG CGCTACCTCG ACATCGGTGT CGGTCGCGTG
GTCATCGGCT CGGCAGCCGT AACCAATCCA AAGCTGGTCG AAGAGCTGCT GCACACCTAC
ACCTCCTCAC AGATTGTTGT CGGCATCGAT GCAGAGAACG GAATCCCGAA AATCAAAGGG
TGGACCGAAA GCAGCATGAT TCAGGACTAC GATCTGGCGT TGCAGATGAA AGAGATGGGC
ATCGAGCGCA TCATCTACAC CGACATCTCC CGCGACGGCA TGATGCAGGG CTTTGGTTAC
GAAAGCACCA GACGCTTCGC CGAAAGGGCA GGGATGAAAA TTACCGCCTC CGGTGGAGTT
ACCAATGCCG AAGACCTGCA TCGGCTCAAT GAACTCCAAC CCTTCGGCGT TGATTCCGTC
ATTATTGGCA AAGCCCTCTA CGAATGCAAT TTTCCCTGTC AGGAGCTTTG GTACAACTTT
GAAGAGGAGA TCAGCCTCGA TCACAATTTC TCGACAGCCC GAAAAAAATA G
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| Protein sequence | MLIIPAIDIK EGKCVRLTRG DFSQKKIYLD NPNDMAIIWR KQNAKMLHIV DLDAALTGEM
VNFEKIREIV TNLDIPVQVG GGIRSADAVK RYLDIGVGRV VIGSAAVTNP KLVEELLHTY
TSSQIVVGID AENGIPKIKG WTESSMIQDY DLALQMKEMG IERIIYTDIS RDGMMQGFGY
ESTRRFAERA GMKITASGGV TNAEDLHRLN ELQPFGVDSV IIGKALYECN FPCQELWYNF
EEEISLDHNF STARKK
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