| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0493 |
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| Symbol | |
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| ID | 6462052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 482307 |
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| End bp | 483740 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642726781 |
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| Product | putative oxidoreductase |
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| Protein accession | YP_002017436 |
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| Protein GI | 194335642 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01316] glutamate synthase (NADPH), homotetrameric
[TIGR01318] glutamate synthase small subunit family protein, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0661627 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGCAC AACATATCAC GACCAAAGAA CGCCTTGCCA TACCGCGTCA ACAGATGCCG
TCTCAGGATC CGGTGATACG GAGTCACAAC TTTCAGGAGG TCAATCTTGG CTATACGATT
GAGCAGGCTC AGCGGGAGGC TCAGCGTTGT ATTCAGTGTA AGGATCCGGT CTGCATCAAG
GGGTGCCCGG TCAACATCAA GATTGATCAG TTCATAAAGC TTATTGCTGA TGGCAATTTT
CTGGGTGCGG CCCGAAAAAT CAAGGAGGAT AATGTTTTGC CTGCGATCTG TGGCAGAGTC
TGCCCGCAGG AGGATCAGTG CGAGAAAACA TGCGTGCTCG CCAAAAAATA TACTCCCGTT
GCTATCGGCA ACCTCGAACG TTTCGCGGCT GATTATGAGC GTGAAAACGG GAGCGTGGAG
TTGCCGACGG TACAACCGGC AACCGGAAAA AAAGTTGCGG TTATCGGCAG CGGACCGGCT
GGCTTGAGCT GTGCCAACGA TCTGGTGCAG TTGGGCCATG CGGTGACGGT TTTTGAGGCG
TTGCATGAGC TGGGCGGCGT CCTGATGTAT GGCATTCCGG AATTCCGCCT TCCCAAAGAG
ATTGTGCAGG CTGAAATTGA GGGTATGAAA AAACTGGGAG TGGTTTTTAT CACCAATTCG
GTTGCTGGCC GTTCGGTCAC CATTGATGAG CTGCTTGAAG AGGAGGGATT TGATGCGATT
TTTATTGGGG TGGGAGCCGG TTTGCCCTGG TTTATGGGTA TCCCCGGAGA AAATCTGCTC
GGGGTCTATT CCGCCAATGA GTTTTTGACG AGGGTCAACC TGATGAAGTC TTATCAGTTC
CCTGACAATG ATACTCCGGT GTTTAACTGC ACGGGGAAAA ATGTCGCGGT CTTCGGTGGG
GGCAACACGG CGATGGATGC GGTTCGCACG GCAAAAAGGC TCGGCGCGGA GCACGCTTAT
ATCGTTTACC GCCGTTCTGA GGCTGAGATG CCTGCACGGC TTGAGGAGGT GCATCATGCA
AAGGAGGAGG GGATTGAATT CCTTATGCTC ATGAACCCTC TGGAGTTTGT TGGCAATGAG
GAGCAGTGGC TTACGGGCGC AAAGTGCCTC CGCATGGAGC TGGGCGAACC GGACGATTCC
GGACGACGAC GCCCTGTGCC GATCAAGGGC TCAGAGTTCA TCCTCCCTGT TGATATGGCG
ATTATTTCGA TCGGTAATGG TTCAAATCCG CTCATCCAGC AGACAACGCC GGATATTGAG
GTCAGCAAGC GGGATACGAT TGTTGTGGAT ATCAATACCA TGGCAACCTC GAAAGAGAGT
GTCTATGCCG GTGGCGATAT TGTTACCGGT GGCGCTACGG TTATTCTTGC CATGGGTGCA
GGAAGAACTG CTGCTGCGGC AATTCATGAG AAATTGATGG CTGCCGGCGA GTAG
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| Protein sequence | MDAQHITTKE RLAIPRQQMP SQDPVIRSHN FQEVNLGYTI EQAQREAQRC IQCKDPVCIK
GCPVNIKIDQ FIKLIADGNF LGAARKIKED NVLPAICGRV CPQEDQCEKT CVLAKKYTPV
AIGNLERFAA DYERENGSVE LPTVQPATGK KVAVIGSGPA GLSCANDLVQ LGHAVTVFEA
LHELGGVLMY GIPEFRLPKE IVQAEIEGMK KLGVVFITNS VAGRSVTIDE LLEEEGFDAI
FIGVGAGLPW FMGIPGENLL GVYSANEFLT RVNLMKSYQF PDNDTPVFNC TGKNVAVFGG
GNTAMDAVRT AKRLGAEHAY IVYRRSEAEM PARLEEVHHA KEEGIEFLML MNPLEFVGNE
EQWLTGAKCL RMELGEPDDS GRRRPVPIKG SEFILPVDMA IISIGNGSNP LIQQTTPDIE
VSKRDTIVVD INTMATSKES VYAGGDIVTG GATVILAMGA GRTAAAAIHE KLMAAGE
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