Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0492 |
Symbol | |
ID | 6462054 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 481114 |
End bp | 482127 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642726780 |
Product | cobalamin (vitamin B12) biosynthesis CbiM protein |
Protein accession | YP_002017435 |
Protein GI | 194335641 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0310] ABC-type Co2+ transport system, permease component |
TIGRFAM ID | [TIGR00123] cobalamin biosynthesis protein CbiM |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.267913 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATATGG CGGATGCGCT TCTTTCGCCG GTTGTCGGGG GGGGATTCTG GATTGTGAGC GGAGCGCTGA TCGGTTATTC GGCGAAAAAA ATCACCGAAG AGCGTGATAA CAGTAAAACA GCGCTCATGG GTGTGCTCGG CGCTTTTGTT TTTGCTGCGC AGATGATCAA TTTCACGCTT CCTGGCACTG GTTCCAGCGG TCACCTGGGC GGCGGGCTTC TCCTTGCTGT CCTGCTCGGC CCATACCGGG CATTTATCAC CCTTGCCTCG GTACTCATTA TCCAGTGCCT TTTTTTTGCT GACGGGGGGC TGCTTGCGCT TGGCTGCAAT GTGTTCAACC TTGCCTTTTT TCCCTCATTT ATTGCTTTTC CTTTTCTGTA TCGGGTTATT GCCGGAAATG CTCCAACTCC GGGGAAACTT GCTGTCGGCA GCTTGACGGC TGCAACTGCG GCTCTCCTGA TGGGTGCATT GTCGGTTGTT CTGGAGACAC TCTTTTCTGG TATAACCGAG TTACCCTTCG GCACCTTTGT TCTTTTCATG CTGCCAGTCC ATCTTGCCAT CGGGGTTGTT GAGGGTCTGG TTACCTGGGG CGTGCTTGCT TTTGTTGCCC GAACAGAACC GGGACTGCTT GTTCCGGCAA AAGCGGCTGT TCATCCCCGT TTTACCTTTG CACTCTTTGC CATTCTGGCT CTTTTCGTCG GAGGGGTGGG GTCGTGGTTT GCCTCTTCGC AACCTGACGG CCTGGAGTGG TCGATTGCGA AGGTATCGGG CTCCAAAGAG TTCAGCCCGG CAGGCGGAGC TGTGCATGAG GCGCTTGAAG CTTTTCAGCA GAAGGTTGCC TTTCTTCCCG ATTATGGCTT CAAATCTGCC CCGGAATTCC TTGCAAACCC GGAGTCACCG GTCGATGCGG GTAGCAGTTT GTCGGGTATT GTGGGCAGCC TTTCGGTTCT TGCTGCTGCC GGAACCGTCG GTCTTTTGCT GGGCAGAAAA CAGAAGGGAG AAAAACAGCG GTGA
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Protein sequence | MHMADALLSP VVGGGFWIVS GALIGYSAKK ITEERDNSKT ALMGVLGAFV FAAQMINFTL PGTGSSGHLG GGLLLAVLLG PYRAFITLAS VLIIQCLFFA DGGLLALGCN VFNLAFFPSF IAFPFLYRVI AGNAPTPGKL AVGSLTAATA ALLMGALSVV LETLFSGITE LPFGTFVLFM LPVHLAIGVV EGLVTWGVLA FVARTEPGLL VPAKAAVHPR FTFALFAILA LFVGGVGSWF ASSQPDGLEW SIAKVSGSKE FSPAGGAVHE ALEAFQQKVA FLPDYGFKSA PEFLANPESP VDAGSSLSGI VGSLSVLAAA GTVGLLLGRK QKGEKQR
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