Gene Ppha_0490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0490 
Symbol 
ID6462059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp479616 
End bp480335 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content54% 
IMG OID642726778 
ProductABC transporter related 
Protein accessionYP_002017433 
Protein GI194335639 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1122] ABC-type cobalt transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGCTA TTGAAGGACT CTGCTTTTCC TGGCCTGACG GCACAAAGGC CATCGACCAT 
ATCAGCCTTG CTGTCGGCGA AGGTGATTCC GTGGGTATTG TGGGGGCAAA TGGCGCTGGA
AAATCGACGC TGGTCAACCA CCTGAATGGC TACTTTCTGC CCCAGAAGGG CTCCATTTCG
ATTGGCGGCG TAGACCTGAA CAAAAAGAAT CTTGACCGAA TCCACAGGAT GGTTGGTCTG
CTCTTTCAAA ATCCGGATGA CCAGCTTTTT ACGGCACGGC TTTATGATGA TGTTGCGTTC
GGGCCGGAGA ATCTGGGGAT GGATGCGGCC GAGGTCGCAA TGGTGGTTGA AGCGAGGCTC
CGTGAGCTGA ACCTCTGGGA GCTGCGCAAC AGAGCGCCTT CACAGCTTTC GCAGGGTCAA
AAGCGCTTTG CCTCCTTTGC TGCGGTTCTG GTCATGAAAC CGGAGGTGAT GGTGATGGAT
GAACCCACTG CCGATCTTGA CCCGAAAAAC CGCAGAAAAC TGATCAACCT GGTTAACGGG
CTTGGCATAA CAAGAATAAC GGTATCACAC GACCTTGATT TTATCCAGGA TACCTGCCAG
CGAGTCTGCA TCATGAAGCA GGGGCGCATT ACGGCTGACG GGCCGACAGA AGAGATTCTC
GGGAACAGGG AGCTGCTTGA GGCCAACGAT CTGGAACTGC CGCTCCGCCT TCAGCGATAG
 
Protein sequence
MIAIEGLCFS WPDGTKAIDH ISLAVGEGDS VGIVGANGAG KSTLVNHLNG YFLPQKGSIS 
IGGVDLNKKN LDRIHRMVGL LFQNPDDQLF TARLYDDVAF GPENLGMDAA EVAMVVEARL
RELNLWELRN RAPSQLSQGQ KRFASFAAVL VMKPEVMVMD EPTADLDPKN RRKLINLVNG
LGITRITVSH DLDFIQDTCQ RVCIMKQGRI TADGPTEEIL GNRELLEAND LELPLRLQR