| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0478 |
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| Symbol | |
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| ID | 6462093 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 466107 |
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| End bp | 468011 |
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| Gene Length | 1905 bp |
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| Protein Length | 634 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642726766 |
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| Product | ABC transporter related |
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| Protein accession | YP_002017421 |
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| Protein GI | 194335627 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component
[COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGCTG CTCTTGATGT GGGTGTGAGG GAGAAAACGG CAGAACGAAT CGTACGTGCT
GCCATGTTCA TTGCTCTGGC TGCGCTTCCG ACTTTCTGGC ATGGTCAGTA TGCTCTTGGC
CTGCTTACGC TGATGGCGGT CTATGGCGTT CTTCTTATCG GTCTTGACGC AACGGTGGGA
TATCTGGGTC AGGTCAACCT TGCCCAGGCG GCGCTGTTTG CGCTCGGCGC TTATGGCGCG
GCTCTTGCCG TACAGGCTGG CGCTCCCCTG CCGTTGGCGC TGGTGGCTGG AATCGCTGCC
GCCCTGATTC CCGGCGCTGC TCTGGCGCTG CCAGCCCTGC GGCTTGAAGG ACCGCAGTTT
GCGCTTTCCA CCCTCTCTTT CGCGACCCTG TCGGTTATTG TCCTTAATGA GTTTGAGTCG
GTTACCAATG GCGCTCTTGG CTTATCCGTT ACCAGGCCCC GGCTTTTCGG GCTGATCCTC
GACTCTACCG GTTTTTACTG GCTCTGTCTG GCGACCCTGT TCGTTGCCTG GGAGGCTTCA
CAGAGCCTGC TCAAGTCGCG TTTCGGGCTG GCTATTGAGG CGTTACGTGA CTCGCCAACC
GCCACTGATG CGCTTGGTAT TGGCGCCCTG AGGCACAAGG TACTCGCATT CGCGTGGGGA
AGTACGCTTG CCGGTTTGGC CGGAGGGTTA CATACGATGA ATTTTGGCTA TCTGCAGCCG
GGGGCTTTCG GATATGAGCT GATGGTTATA CTGCTGCTTG GCGTTGTTTT CGGGGGCAGG
CGAAGCCAGT GGGGAGCCTT CCTCGGGGCT GCAGTTGTGG CCATGTTGCC CAATCTGCTC
TCGAACCGCA CGCTTTTTTC CGTTCTCGTC TCTGCAGGAT GCATTCTGAC CTTTGTTCCG
ACCTTTCGTG CGCTGCTGTC GAGACGGGCG CCTGTTTTTC GCGAGGTCGC TCCTGCCTCT
GCCATGGCGT TGGCGGTCGC CCTCTCATTT TTTGTGCAAA ATGTGGAGGA TTGGCGCAAG
GGGATTTTTG CGTTGTTCCT TTTTGCCGTT GTTGTCGGGT TTCCGAATGG AATTGCGGGA
GCGATGACGA CTACACTCCA GAGGCTGATA CGTTTTGCTC CTCTTCCTTT GCCGCCGGCA
GCGGGAGGGA TCGGCTCTTC AAGAAGAGCG AAGGGGATCG CTCTGCGCCT GACCGACCTC
TGTAAATCAT TCGGCGGTGT GCGTGCTGTG GAGAGTGTTT CACTGGAAAT CAGGGAGGGT
GAGACGCTCG GTCTGATCGG GCCTAACGGA TCGGGGAAAA CAACGTTGGT GAATCTGATT
TCCGGCCTCT ATGCCCCTGA TAGTGGTTCG GTTACCATTG CCGGCAGGAG TCCTGTTCCC
GGCAGTCTGA TGTCGGCATG TGCGGCGGGC GCATCCCGAA CCTTTCAGAA CCTGCAGTCT
TTCTCCGGCC TGACTGCACT GGAGTCGGTG CTTGTTTGCC TGAAGGAGGG GGGAGAGCGG
GAGGCTCTGG GCTGGTTGCT TGCTGTCGGT CTGGGAGAGA AGGCAAGAGT GCGCTGTTCC
GAAATGGCGT ATGGTGATTT ACGATTTCTT GAAATTGCAC GGGCGCTGGC TACCCGCCCC
CATCTTCTGA TGCTTGATGA GCCTGCGGCG GGCATGTCGA AACCGGACAT TGCGAGGCTT
GTTCTGCTGA TCGCCTCGAT TAAAGAGGCC GGGGTTCCTA TTTTGCTTAT TGAGCACCAT
CAGGATGTGG TCGCTGAGCT TTGCGACCGG GTTGCTGTGA TGGATGGCGG GCGTCTGATT
GCACTCGGCA CTCCAAATCA GGTACGACGC GACCCCAAAG TAATTGAGGC CTATCTGGGG
AGTGATGACA CTGAAACAGG GAATAATGAG CTGCTGCCAT GCTGA
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| Protein sequence | MFAALDVGVR EKTAERIVRA AMFIALAALP TFWHGQYALG LLTLMAVYGV LLIGLDATVG
YLGQVNLAQA ALFALGAYGA ALAVQAGAPL PLALVAGIAA ALIPGAALAL PALRLEGPQF
ALSTLSFATL SVIVLNEFES VTNGALGLSV TRPRLFGLIL DSTGFYWLCL ATLFVAWEAS
QSLLKSRFGL AIEALRDSPT ATDALGIGAL RHKVLAFAWG STLAGLAGGL HTMNFGYLQP
GAFGYELMVI LLLGVVFGGR RSQWGAFLGA AVVAMLPNLL SNRTLFSVLV SAGCILTFVP
TFRALLSRRA PVFREVAPAS AMALAVALSF FVQNVEDWRK GIFALFLFAV VVGFPNGIAG
AMTTTLQRLI RFAPLPLPPA AGGIGSSRRA KGIALRLTDL CKSFGGVRAV ESVSLEIREG
ETLGLIGPNG SGKTTLVNLI SGLYAPDSGS VTIAGRSPVP GSLMSACAAG ASRTFQNLQS
FSGLTALESV LVCLKEGGER EALGWLLAVG LGEKARVRCS EMAYGDLRFL EIARALATRP
HLLMLDEPAA GMSKPDIARL VLLIASIKEA GVPILLIEHH QDVVAELCDR VAVMDGGRLI
ALGTPNQVRR DPKVIEAYLG SDDTETGNNE LLPC
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