| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0472 |
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| Symbol | |
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| ID | 6462113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 460798 |
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| End bp | 461535 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642726760 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_002017415 |
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| Protein GI | 194335621 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCTTT CGGGCAAAAA GGTATGCTTC ATGACTGGCG CTTCGGGTGT GCTTGGCAGT
GAAATTGCGC TTGCTGTGGC CGGACAGGGA TATACGGTTT TTTTTACCTG GAATGCTTCG
GAGTCGAGGG CTACCGAAGT TCTTGAAAAA ATCAGGTGGA TCAGTCCTCT GTCGCAGATG
GTTCGGTGTG ATGTGTCGAA GAGTGGCGAT ATTGTGCGTG CGTTTGCGAC GTTCAGGGAG
CAGTTTGACC GGCTTGACCT GCTTATTACC AGCGCATCGA ATTTTTTCAG GACACCCTTG
CCCAATGTTA CTGAGGAGCA ATGGGACAGT CTGGTCGATA CCAATCTGAA GGGAACTTTT
TTTACCATGC AGGAGGCTGC TGCAATCATG TGCAAACAGC CCTTCGTCTC GCGCATCATT
ACGATGACGG ATATTTCTGC TGATCTGGTC TGGCGAAACT TTGCACCCTA TACGGTATCG
AAGTGCGGTA TACAGCACCT GACCAGGATT TTCGCAAAGG AGTTTGCACC GACTATTCTG
GTAAACTCTA TAGCTCCGGG AACGATCACA CTCAATCCAC AGAAGGAGAT GGATTCCGAG
GAGGAGATGG TGAGAAAAAT ACCGCTTCAG CGTCTTGGTG ACCCGCTTGA TATTGTTAAA
TGTATCACCT TTCTTCTGGA GAGTGACTAT ATCACCGGTC AGGTTCTTAA TGTGGAGGGT
GGACGGCTTC TGCAGTAA
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| Protein sequence | MTLSGKKVCF MTGASGVLGS EIALAVAGQG YTVFFTWNAS ESRATEVLEK IRWISPLSQM
VRCDVSKSGD IVRAFATFRE QFDRLDLLIT SASNFFRTPL PNVTEEQWDS LVDTNLKGTF
FTMQEAAAIM CKQPFVSRII TMTDISADLV WRNFAPYTVS KCGIQHLTRI FAKEFAPTIL
VNSIAPGTIT LNPQKEMDSE EEMVRKIPLQ RLGDPLDIVK CITFLLESDY ITGQVLNVEG
GRLLQ
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