Gene Ppha_0450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0450 
Symbol 
ID6462187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand- 
Start bp436042 
End bp437133 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content51% 
IMG OID642726737 
ProductGTP-dependent nucleic acid-binding protein EngD 
Protein accessionYP_002017393 
Protein GI194335599 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0012] Predicted GTPase, probable translation factor 
TIGRFAM ID[TIGR00092] GTP-binding protein YchF 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.0274175 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACTTC GCTGCGGCAT TGTCGGATTG CCAAATGTCG GAAAGTCCAC GCTTTTCAAT 
GCCATCACGG CCAAACAGGC TGAAGCGGCA AATTATCCCT TTTGTACCAT TGAGCCCAAT 
GTGGGAACCG TCCTTGTACC GGACGAACGG ATGCAGCAGA TTGCTGATGT CGTAAAAACA 
CCAACGCTGG TACCGGCAAC TCTTGAAATT GTTGATATCG CCGGTCTGGT CAAAGGGGCA 
AGCAAGGGCG AAGGGCTTGG AAACCAGTTT CTTTCCCATA TCAGGGAGGT TGATGCTATC 
GTCCATGTTG TCCGCTGTTT TGAAGATGAC AATATCATCC ATGTTGAGGG GAGAATAGAT 
CCTGCTGATG ATATCGTCAC GATTGAAACG GAGCTGATGC TGGCCGATCT TGACAGTATG 
GAGCGCCGGA TTGACCGACT CCGGAAAAAT GCACGAAAGG ATAAAGAGCT GCTCCTGCAG 
CTTGACGTGG CGGAAAAAAT TATCAGTGGG CTCAGTGATG GCATTCCTGT CCGCAAGATC 
ATTGAAACCC CGGAGGAGCA GGCAATTGCC CGGCAGTTCT TTCTCCTGTC GTCGAAACCA 
ATCCTCTTTG CTGCAAATGT TGCTGAGACC GACCTTCCGG ATGGAAACCA CTTCACCAGA 
AAGGTTGCTG AAATAGCGGA AGCATCGGGC TCAAAAATGC TGATCATCAG TGCAAAAACC 
GAGGCAGAGA TAGCTGAACT GCCCGAGGAG GAGAGACCGG AGTTTCTTGA AAGTCTTGGC 
CTGCATCTCT CCGGTCTCGA CCGGCTGATC AAGACCGCCT ATGACCTGCT TGGCCTGCAG 
ACCTATTTTA CCGCAGGTGA AAAGGAGGTT CATGCCTGGA CGATTCGGAA GGGTGCCGCT 
GCGCCGGAAG CTGCCGGTGC AATCCACTCT GATTTTGAAA AGGGGTTTAT CCGGGCTGAG 
GTGATGTACT ACCGTGACCT TATTGAACTT GGTTCAGAGC AGAAGGTGAA GGTGGCGGGC 
AAGCTTCGCT CGGAGGGGAA GGAGTATATT GTGAGGGATG GGGATGTTAT TGTTTTTCGG 
TTTAATGTTT GA
 
Protein sequence
MSLRCGIVGL PNVGKSTLFN AITAKQAEAA NYPFCTIEPN VGTVLVPDER MQQIADVVKT 
PTLVPATLEI VDIAGLVKGA SKGEGLGNQF LSHIREVDAI VHVVRCFEDD NIIHVEGRID 
PADDIVTIET ELMLADLDSM ERRIDRLRKN ARKDKELLLQ LDVAEKIISG LSDGIPVRKI 
IETPEEQAIA RQFFLLSSKP ILFAANVAET DLPDGNHFTR KVAEIAEASG SKMLIISAKT 
EAEIAELPEE ERPEFLESLG LHLSGLDRLI KTAYDLLGLQ TYFTAGEKEV HAWTIRKGAA 
APEAAGAIHS DFEKGFIRAE VMYYRDLIEL GSEQKVKVAG KLRSEGKEYI VRDGDVIVFR 
FNV