| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0448 |
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| Symbol | ispH |
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| ID | 6462190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 434059 |
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| End bp | 435024 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642726735 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_002017391 |
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| Protein GI | 194335597 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.168186 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAACATAA ACCTCGACAG AACTTCATCA GGCTTCTGCA TTGGAGTTCA GGGAACTATC
TATGCCGCCG AAGAAAAGCT CCAGCAGGAG GGTGGATTAT ACTCTTTCGG TGATATTGTC
CATAATGAGG TCGAGGTGAA ACGGCTTGAA GCTCTCGGCC TTGTAACCGT TGATGAAAGG
GCTTTCAGGG AGCTCAGAGA TGCTCACGTC CTTATCAGGG CACATGGAGA GCCTCCCTCA
ACCTACAGGA TTGCGCGTGA AAATAATCTG ACGGTTACCG ACACCACCTG CCCGGTCGTC
TCCCGACTGC AACGCACAAC AAGATTACTT TTTGAGCTGG GTTACCAGAT TATCATCTAT
GGCAAACAGA GCCATCCGGA AGTTATCGGT ATCAACGGCC AATGCAACAA CCAGGCTGTC
ATTATCAAAC ATGCTGATCT CAGTGATCCT GATGAGTTAA AGGGACTTGA CCTCGCAAAA
AAAAGTGCGC TCATCTCTCA GACCACCATG GATGTTCCGG GATTTTACGA GCTGAAAGCG
CTTCTTGAGG CACGTTTCGC TCAATACCTC TCCAGTGAAA AGAGCGCATG GATGGCCATT
CGCGATATCG ATATCACTGC CGCGATGACC GGAGTGCTCT CCATGCCTTC GCTGCTCTTC
AAAGATACCA TCTGCCGCCA GGTATCGAGT CGAAACCAGA AGTTGCATGA CTTTTCCCTT
GCCAATGATG TTGTCATTTT TGTGGCCGGG AAAAAAAGTT CTAACGGGCA GGTACTCTAC
CATATCTGCA AGGAGGCAAA TCCCCGGAGC TATTTTATCG AAGAGATTGA GGAGATTGAG
GAGAGATGGT TACGCAACAG TGACGGCAGG GCTGTGGCGA CGGTGGGCGT ATGCGGCGCC
ACCTCAACGC CTATGTGGCA TCTTGAAAAA GTCGCTCTCC ATCTTGAAAA GAACTTTGCA
CAGTAA
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| Protein sequence | MNINLDRTSS GFCIGVQGTI YAAEEKLQQE GGLYSFGDIV HNEVEVKRLE ALGLVTVDER
AFRELRDAHV LIRAHGEPPS TYRIARENNL TVTDTTCPVV SRLQRTTRLL FELGYQIIIY
GKQSHPEVIG INGQCNNQAV IIKHADLSDP DELKGLDLAK KSALISQTTM DVPGFYELKA
LLEARFAQYL SSEKSAWMAI RDIDITAAMT GVLSMPSLLF KDTICRQVSS RNQKLHDFSL
ANDVVIFVAG KKSSNGQVLY HICKEANPRS YFIEEIEEIE ERWLRNSDGR AVATVGVCGA
TSTPMWHLEK VALHLEKNFA Q
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