| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0436 |
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| Symbol | |
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| ID | 6462211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 421183 |
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| End bp | 422163 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642726723 |
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| Product | KpsF/GutQ family protein |
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| Protein accession | YP_002017379 |
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| Protein GI | 194335585 |
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| COG category | [K] Transcription
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation
[COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains |
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| TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATAC CATCCCAAAA ACAGGAAATT ACAGCGCTTG GAAAAATAAT TCTTGATCAG
GAAGCCCGCG CCATTCATTT GATAGCCGAA CGACTTGATG AGAGTTTTTC GGCTGCCGTG
GAACTTCTTG CATCATGCCA GGGAAAAATC ATCATCTCCG GTATGGGGAA ATCAGGTATC
ATTGCACAAA AAATAGCCGC AACGATGTCA TCAACTGGTT CAACAGCCCT TTTTCTTCAT
CCGGCAGATG CCGCTCATGG AGATCTTGGG ATTGTCGGTC ATACCGATAC CGTCATCTGT
CTTTCGAAAA GCGGCACAAC CGAGGAGCTG AACTTTATCA TCCCGGCACT CCGCCAGATT
GGTGCAAAAA TTATTGCGAT GACTGGCAAT CCCCGCTCTT TTCTTGCCCA GAAAGCGGAT
ATCACACTTG ATACCGGCAT AGCAAAAGAG GCTTGTCCGT ATGATCTGGC ACCGACAACC
TCGACAACGG CTATGCTCGC CATGGGAGAT GCCCTTGCCA TTGCGTTGAT GCAGGTGAAA
AATTTCACAC AAAGAGATTT TGCGCTGACC CATCCCAAAG GATCACTCGG ACGACGGTTG
ACTGTAAAAG TAAGTGACAT CATGGCAAAA GGCGATGCTG TCCCTATCGT GTCAGAGAGT
GCTTCGGTGA CCGGTCTTAT CCTTGAAATG ACATCGAAGC GATATGGAGT AAGCGCTGTT
ATAACTGATG ATGGTAAGCT GTGCGGCATT TTTACCGATG GTGACCTTCG TCGCCTGGTG
CAGAGTGGCA GGGAGTTCCT CAACCTCAGC GCGGGTTCAG TTATGACTGC AAATCCCAAG
ACTGTCACAG GCGACACCAT GGCTAAAGAG TGTCTTGACA TTCTTGAAAC CTGGCGCATT
ACACAGTTGC TGGTGTGCGA CGATGAACAG CATCCTGTTG GAATGGTGCA TATTCATGAT
TTAATTGTAC TGGGGTTATA G
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| Protein sequence | MSIPSQKQEI TALGKIILDQ EARAIHLIAE RLDESFSAAV ELLASCQGKI IISGMGKSGI
IAQKIAATMS STGSTALFLH PADAAHGDLG IVGHTDTVIC LSKSGTTEEL NFIIPALRQI
GAKIIAMTGN PRSFLAQKAD ITLDTGIAKE ACPYDLAPTT STTAMLAMGD ALAIALMQVK
NFTQRDFALT HPKGSLGRRL TVKVSDIMAK GDAVPIVSES ASVTGLILEM TSKRYGVSAV
ITDDGKLCGI FTDGDLRRLV QSGREFLNLS AGSVMTANPK TVTGDTMAKE CLDILETWRI
TQLLVCDDEQ HPVGMVHIHD LIVLGL
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