| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0434 |
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| Symbol | gatA |
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| ID | 6462214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 418650 |
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| End bp | 420077 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642726721 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit A |
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| Protein accession | YP_002017377 |
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| Protein GI | 194335583 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCAATTTA GTAGTTACGA AGATCTTCGA TCCAGGCTTG TCTCGCATGC AATAACCTGT
GAAGAGGTCG TGCGTTTTTA TTTGGAACGT ATAGAGAATC ATCGCGGCGA TAATATTTAC
ATAACGGTTT TTCATGATCA GGCGTTGGAA CGGGCAAGAA CCCTCGATCG GAAACTCAGG
GAGGGAGGGA ATCCTGGAAA ATTGTTCGGG ATGCCTATGG CAATCAAGGA CAATATTGCC
ATGAAAAATT GCAGGCTTAC CTGTGCCTCG AAAATTCTTG AGAATTACGA AAGTGTTTAT
GATGCCACTG CAGTGCTCCG ACTTGAGGAG GCAGACGCTA TTTTTCTTGG AAAAACCAAT
ATGGACGAGT TTGCCATGGG CAGCTCGAAT GAGAATTCAG CATTTGGCAA CGTTCCCAAT
CCCTTTGATA AAACAAGAGT TCCTGGAGGC AGTTCAGGTG GATCTGCTGC TGCCGTTGCA
AATGGCCTTG CTCTGGTGGC TCTCGGATCG GATACCGGAG GCTCTGTTCG TCAGCCAGCA
GGTTTCTGTG ATATTGTTGG GCTGAAACCG ACCTATGGCA GGATCTCCCG TTATGGTCTT
GTGGCGTTTG CCTCCTCCTT CGATCAGATA GGAGTGCTTG GTCTGAACTG TGATGATGTT
GCTCTTGTGC TCGGGGTTAT GGCGGGCAAG GATGAAGGTG ATGCCACTTC CTCCCGGCAT
CCCGTTGCCG ATTACGCATC TGAAATGGCG ACGCTCTCTG TTGATGGATT AAAGATAGGT
GTACCGAAAG AGTATTTTCC TGAAACACTG AACCCTGAAG TATCCCGCAT GGTGAAGGGA
AAGCTTGAAG AGCTTCGCGC TCAGGGAGCT GAACTTGTTC CAGTCACGCT TCCTGACAGT
GCATATGCCA TAGCAGCCTA CTACATACTT GTTACCGCCG AAGCCTCATC CAATCTTGCC
CGTTTTGATG GTGCACGATA TGGCTACCGC TCCGAAATGT CGGAAGATCT TGCCGCCATG
TATGTCAATT CAAGGACAGA AGGGTTCGGC AGGGAGGTCA AGCGCCGCAT TATGCTTGGA
ACCTACGTGC TTTCCGCAGG CTATTATGAT ACCTACTACA AAAAGGCACA GCAGGTCCGC
CGGGTTTTTC AGGATCGGTA TCGTGAGGCC TTGGATAAGG TCGATGTCAT AGCCGGTCCG
ACCTCACCCT TTCCTCCTTT TGGGATCGGT GACAAAACCG AAAATCCTCT TGAAATGTAT
CTTGCCGATG TTTTCACCGT TCCGGCAAGT ATCGTCGGTA TGCCGGCAAT CAGTGTTCCA
CTCGGGTTTG ACAGTATGAA CCTGCCTGTA GGGATGCACC TTATCTGTAA TTTTTTTGAG
GAAGGAAAGC TGCTCGGGAT AGCCCGACAC ATGCAGCGAT CCCTGTGA
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| Protein sequence | MQFSSYEDLR SRLVSHAITC EEVVRFYLER IENHRGDNIY ITVFHDQALE RARTLDRKLR
EGGNPGKLFG MPMAIKDNIA MKNCRLTCAS KILENYESVY DATAVLRLEE ADAIFLGKTN
MDEFAMGSSN ENSAFGNVPN PFDKTRVPGG SSGGSAAAVA NGLALVALGS DTGGSVRQPA
GFCDIVGLKP TYGRISRYGL VAFASSFDQI GVLGLNCDDV ALVLGVMAGK DEGDATSSRH
PVADYASEMA TLSVDGLKIG VPKEYFPETL NPEVSRMVKG KLEELRAQGA ELVPVTLPDS
AYAIAAYYIL VTAEASSNLA RFDGARYGYR SEMSEDLAAM YVNSRTEGFG REVKRRIMLG
TYVLSAGYYD TYYKKAQQVR RVFQDRYREA LDKVDVIAGP TSPFPPFGIG DKTENPLEMY
LADVFTVPAS IVGMPAISVP LGFDSMNLPV GMHLICNFFE EGKLLGIARH MQRSL
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