Gene Ppha_0402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0402 
SymbolrpsO 
ID6462325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp388566 
End bp388835 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content44% 
IMG OID642726689 
Product30S ribosomal protein S15 
Protein accessionYP_002017347 
Protein GI194335553 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0184] Ribosomal protein S15P/S13E 
TIGRFAM ID[TIGR00952] ribosomal protein S15, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0216687 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCTGA CAAAAGAGTT TAAAGCCGAC GTAATCAAGC AGTTTGGCGC TTCAGAGAAG 
AATACCGGAA AATCCGAGGT TCAGGTTGCC TTATATACCC GTAGAATCAG CGATCTTACT
GGACATTTGC AGTTGCACCC GAAAGACAAG CATTCGCGTC GCGGATTGCT GATGCTTGTG
GCAAAGCGCA AGAAAATGCT GAATTACGTG AAAAATATCG ATATTGATCG TTATCGCAAA
GTGATAGCTG AACTTGATCT TCGCAAGTAA
 
Protein sequence
MSLTKEFKAD VIKQFGASEK NTGKSEVQVA LYTRRISDLT GHLQLHPKDK HSRRGLLMLV 
AKRKKMLNYV KNIDIDRYRK VIAELDLRK