Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0397 |
Symbol | nusA |
ID | 6462347 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 381840 |
End bp | 383384 |
Gene Length | 1545 bp |
Protein Length | 514 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 642726685 |
Product | transcription elongation factor NusA |
Protein accession | YP_002017343 |
Protein GI | 194335549 |
COG category | [K] Transcription |
COG ID | [COG0195] Transcription elongation factor |
TIGRFAM ID | [TIGR01953] transcription termination factor NusA |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00167375 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCAGAA AGAAGATAAA AGATGAGGGA CAAGATCGGA GGTTGCAGAT TGCCAGCGCT TTCGGCGAAA TCGAGCAGTC CAAGATCTTT CTGGATAAAC GCACGGAAAG TGCGGCTGTA AAAATGGATA TTGCCGATCT CCTTAAGGAT ATTATCCAGA AGCAACTCAG AAAAGACTAT GATCCCGAAG TTGAATCCAA CATTTTCATC AACCCCGAAC GGGGAGATTT CGAAGTCTAT ATTCTGAAAA AAATTGTTGA AGAAATAGAT ATAGAGAGCA TCGAGATCAC GCTCAAAGAG GTAAGAAAAA TTGACGACTC CCTTGAAATT GGAGATTATT ATGAAGAGGG GCCGATCCGC CTTGAAGACT ATCTGAGTCG CAAATCCATT CAGATTATCA AACAGTCAGT GCAGAAGAAG GTACGTGACC TTGAACGGCT TGTTGTTTAC GAAGAGTGTC TTGAAAAAGT GGGTGAGATT GTTGCTGGTG AGGTCTATCA GGTTCGTGCG AATGAAGTTA TTTTCACTTA CAACACATCG AAAGACCATC GCGTTGAACT GGTGTTGCCG AAGTCAGAGA TGATGAAAAA AGATAATCCG CGTCGAACCC CGCGGATGAA ACTCTATGTC AAGCGTATTG AGCGTGAGAA AGCAAAAGTG CGGCTTGATG ATGGCAGTAT GGTTGAACGT GAAAAAGCAG ACGGCGGCAT GAAAGTCATT GTGTCGAGAG TTGATGACCG TTTTTTATAC AAGCTGTTTG AACACGAAGT TCCGGAAATT CTTGATGGGC TTATTGTTAT CAAGGCCATT GCACGGGTAC CGGGTGAACG CGCAAAGGTT GCAGTTGAAT CCACCAGTGC AAGGATAGAC CCGGTTGGAG CAACAGTCGG ATATCGAGGG AAACGTATTC AAAGCATAGT CAAAGAGCTG AACAACGAAA ATATCGATGT TATCTACTAT GCCGATGAAC CACAGATTTA TATTTCAAGG GCCATGCAGC CTGCAAAAAT TGATCCTCTT ACGGTTCATG CCGATGTGAA AACACGGAAA GCAAGGGTAA TGCTCAAGCC CGACCAGATC AAATATGCTA TTGGAAAGAA TGGGAACAAT ATCCATCTGG CTGAAAAACT GACGGGTTAT GAAATCGATG TTTATCGTGA TGTGATCGAC AAATCGACGG AAGATCCTAC CGATATTGAT ATCATTGAGT TCCGTGAAGA GTTTGGTGAT GACATGATTT ACCAGCTTCT TGATGGTGGT CTCGACACTG CCAAAAAGGT ACTGAAGGCT GGAGTTGATG AAATTGAACT CTCCCTTTTG GGATCGTCCA AACCCGAAGA GCAGACAGTT TTTGGGAAAA GTTACAAGAC CGGCGTAAAA CCGAGGGAGC GGAAAGTTAC CGACGAGGAG AAGCGCTATT GGAAGAAGAT TGCTGAAAAT ATTTATAAAA CCGTAAAGGA ACAGTTTACC GAAGCGGATC TGGAGGCTCT GTTTGATGAT GAAATTGAGC CTGAAACAGA TGACTTGGCG GTTGAAAAAT CATGA
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Protein sequence | MVRKKIKDEG QDRRLQIASA FGEIEQSKIF LDKRTESAAV KMDIADLLKD IIQKQLRKDY DPEVESNIFI NPERGDFEVY ILKKIVEEID IESIEITLKE VRKIDDSLEI GDYYEEGPIR LEDYLSRKSI QIIKQSVQKK VRDLERLVVY EECLEKVGEI VAGEVYQVRA NEVIFTYNTS KDHRVELVLP KSEMMKKDNP RRTPRMKLYV KRIEREKAKV RLDDGSMVER EKADGGMKVI VSRVDDRFLY KLFEHEVPEI LDGLIVIKAI ARVPGERAKV AVESTSARID PVGATVGYRG KRIQSIVKEL NNENIDVIYY ADEPQIYISR AMQPAKIDPL TVHADVKTRK ARVMLKPDQI KYAIGKNGNN IHLAEKLTGY EIDVYRDVID KSTEDPTDID IIEFREEFGD DMIYQLLDGG LDTAKKVLKA GVDEIELSLL GSSKPEEQTV FGKSYKTGVK PRERKVTDEE KRYWKKIAEN IYKTVKEQFT EADLEALFDD EIEPETDDLA VEKS
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