| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0374 |
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| Symbol | |
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| ID | 6462406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 358167 |
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| End bp | 358376 |
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| Gene Length | 210 bp |
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| Protein Length | 69 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 642726662 |
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| Product | cold-shock DNA-binding domain protein |
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| Protein accession | YP_002017320 |
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| Protein GI | 194335526 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000381403 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGTACTC AGGTTGAAGG AACAGTCAAA TGGTTCAACG AAGAAAAAGG TTACGGTTTT
ATTGAGCAGA AAGGCGGAAA AGATGTTTTT GTACATCACA GTGCTATCAA TGGCACCGGA
CGCAAAACTC TTGTTGAAGG CCAGAAAGTT ATGATGGAAG TAACTCAGGG AGCAAAAGGC
CTCCAGGCTG AAGATGTAAC TCCTCTTTAA
|
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| Protein sequence | MGTQVEGTVK WFNEEKGYGF IEQKGGKDVF VHHSAINGTG RKTLVEGQKV MMEVTQGAKG
LQAEDVTPL
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